RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
SVIP-205ENST00000533774 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
SVIP-205ENST00000533774 C20orf197Q8N268 126 aa4.51□□□□□ -1.69
SVIP-205ENST00000533774 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
SVIP-205ENST00000533774 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SVIP-205ENST00000533774 UBL5Q9BZL1 73 aa4.47□□□□□ -1.69
SVIP-205ENST00000533774 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
SVIP-205ENST00000533774 MT1GP13640 62 aa4.46□□□□□ -1.7
SVIP-205ENST00000533774 MT1MQ8N339 61 aa4.43□□□□□ -1.7
SVIP-205ENST00000533774 OCR1Q9BZK8 76 aa4.43□□□□□ -1.7
SVIP-205ENST00000533774 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
SVIP-205ENST00000533774 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
SVIP-205ENST00000533774 H0Y9P7 68 aa4.36□□□□□ -1.71
SVIP-205ENST00000533774 ROMO1P60602 79 aa4.36□□□□□ -1.71
SVIP-205ENST00000533774 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
SVIP-205ENST00000533774 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SVIP-205ENST00000533774 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
SVIP-205ENST00000533774 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
SVIP-205ENST00000533774 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
SVIP-205ENST00000533774 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
SVIP-205ENST00000533774 MT1LQ93083 61 aa4.32□□□□□ -1.72
SVIP-205ENST00000533774 A8MU10 97 aa4.3□□□□□ -1.72
SVIP-205ENST00000533774 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
SVIP-205ENST00000533774 K7ERS5 55 aa4.27□□□□□ -1.73
SVIP-205ENST00000533774 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
SVIP-205ENST00000533774 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
SVIP-205ENST00000533774 A6NED7 52 aa4.24□□□□□ -1.73
SVIP-205ENST00000533774 A0A0D9SG42 100 aa4.22□□□□□ -1.73
SVIP-205ENST00000533774 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
SVIP-205ENST00000533774 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
SVIP-205ENST00000533774 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
SVIP-205ENST00000533774 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
SVIP-205ENST00000533774 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
SVIP-205ENST00000533774 LINC01558Q9Y6Z2 57 aa4.17□□□□□ -1.74
SVIP-205ENST00000533774 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
SVIP-205ENST00000533774 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
SVIP-205ENST00000533774 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
SVIP-205ENST00000533774 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
SVIP-205ENST00000533774 H3BPC8 53 aa4.11□□□□□ -1.75
SVIP-205ENST00000533774 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
SVIP-205ENST00000533774 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
SVIP-205ENST00000533774 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SVIP-205ENST00000533774 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
SVIP-205ENST00000533774 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
SVIP-205ENST00000533774 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
SVIP-205ENST00000533774 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
SVIP-205ENST00000533774 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
SVIP-205ENST00000533774 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SVIP-205ENST00000533774 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
SVIP-205ENST00000533774 UQCR11O14957 56 aa3.97□□□□□ -1.77
SVIP-205ENST00000533774 ACYP2P14621 99 aa3.94□□□□□ -1.78
SVIP-205ENST00000533774 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
SVIP-205ENST00000533774 A0A1B0GU33 70 aa3.92□□□□□ -1.78
SVIP-205ENST00000533774 COA5Q86WW8 74 aa3.91□□□□□ -1.78
SVIP-205ENST00000533774 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SVIP-205ENST00000533774 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
SVIP-205ENST00000533774 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
SVIP-205ENST00000533774 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
SVIP-205ENST00000533774 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
SVIP-205ENST00000533774 TNP1P09430 55 aa3.73□□□□□ -1.81
SVIP-205ENST00000533774 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
SVIP-205ENST00000533774 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SVIP-205ENST00000533774 A0A1B0GU69 56 aa3.72□□□□□ -1.81
SVIP-205ENST00000533774 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
SVIP-205ENST00000533774 MT1AP04731 61 aa3.64□□□□□ -1.83
SVIP-205ENST00000533774 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SVIP-205ENST00000533774 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
SVIP-205ENST00000533774 INE1O15225 51 aa3.51□□□□□ -1.85
SVIP-205ENST00000533774 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
SVIP-205ENST00000533774 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SVIP-205ENST00000533774 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
SVIP-205ENST00000533774 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
SVIP-205ENST00000533774 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
SVIP-205ENST00000533774 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
SVIP-205ENST00000533774 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
SVIP-205ENST00000533774 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
SVIP-205ENST00000533774 PRM1P04553 51 aa1.83□□□□□ -2.12
SVIP-205ENST00000533774 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 65.4 ms