RNA–Protein interactions for RNA: ENST00000533701.1

AP004242.1-201, humanhuman

BASIC

Gene AP004242.1, Length 349 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004242.1-201ENST00000533701 DNAH7Q8WXX0 4024 aa0.9□□□□□ -2.27
AP004242.1-201ENST00000533701 DNAH9Q9NYC9 4486 aa0.89□□□□□ -2.27
AP004242.1-201ENST00000533701 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
AP004242.1-201ENST00000533701 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
AP004242.1-201ENST00000533701 HSPG2P98160 4391 aa0.88□□□□□ -2.27
AP004242.1-201ENST00000533701 CMYA5Q8N3K9 4069 aa0.87□□□□□ -2.27
AP004242.1-201ENST00000533701 RNF213Q63HN8 5207 aa0.87□□□□□ -2.27
AP004242.1-201ENST00000533701 NSD1Q96L73 2696 aaPredicted RBP0.87□□□□□ -2.27
AP004242.1-201ENST00000533701 DNAH6Q9C0G6 4158 aa0.87□□□□□ -2.27
AP004242.1-201ENST00000533701 PKD1P98161 4303 aa0.87□□□□□ -2.27
AP004242.1-201ENST00000533701 HECTD4Q9Y4D8 3996 aa0.86□□□□□ -2.27
AP004242.1-201ENST00000533701 GPR98Q8WXG9 6306 aa0.86□□□□□ -2.27
AP004242.1-201ENST00000533701 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
AP004242.1-201ENST00000533701 ITPR2Q14571 2701 aa0.86□□□□□ -2.27
AP004242.1-201ENST00000533701 COL7A1Q02388 2944 aa0.85□□□□□ -2.27
AP004242.1-201ENST00000533701 MGAM2Q2M2H8 2515 aa0.85□□□□□ -2.27
AP004242.1-201ENST00000533701 MT1HL1P0DM35 61 aa0.84□□□□□ -2.27
AP004242.1-201ENST00000533701 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
AP004242.1-201ENST00000533701 KRTAP19-2Q3LHN2 52 aa0.83□□□□□ -2.28
AP004242.1-201ENST00000533701 APOBP04114 4563 aaKnown RBP0.82□□□□□ -2.28
AP004242.1-201ENST00000533701 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
AP004242.1-201ENST00000533701 LRP1Q07954 4544 aaKnown RBP0.82□□□□□ -2.28
AP004242.1-201ENST00000533701 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
AP004242.1-201ENST00000533701 LPAP08519 4548 aa0.81□□□□□ -2.28
AP004242.1-201ENST00000533701 LRP1BQ9NZR2 4599 aa0.81□□□□□ -2.28
AP004242.1-201ENST00000533701 PKHD1P08F94 4074 aa0.81□□□□□ -2.28
AP004242.1-201ENST00000533701 PLECQ15149 4684 aaKnown RBP0.8□□□□□ -2.28
AP004242.1-201ENST00000533701 STARD9Q9P2P6 4700 aa0.8□□□□□ -2.28
AP004242.1-201ENST00000533701 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
AP004242.1-201ENST00000533701 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
AP004242.1-201ENST00000533701 NEBP20929 6669 aa0.78□□□□□ -2.28
AP004242.1-201ENST00000533701 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.29
AP004242.1-201ENST00000533701 SPRR2DP22532 72 aa0.77□□□□□ -2.29
AP004242.1-201ENST00000533701 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
AP004242.1-201ENST00000533701 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
AP004242.1-201ENST00000533701 HMCN2Q8NDA2 5059 aa0.77□□□□□ -2.29
AP004242.1-201ENST00000533701 SSPOA2VEC9 5147 aa0.77□□□□□ -2.29
AP004242.1-201ENST00000533701 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
AP004242.1-201ENST00000533701 MT1XP80297 61 aa0.75□□□□□ -2.29
AP004242.1-201ENST00000533701 DYNC1H1Q14204 4646 aaKnown RBP0.75□□□□□ -2.29
AP004242.1-201ENST00000533701 FAT1Q14517 4588 aa0.74□□□□□ -2.29
AP004242.1-201ENST00000533701 MACF1Q9UPN3 7388 aaKnown RBP0.74□□□□□ -2.29
AP004242.1-201ENST00000533701 MT1BP07438 61 aa0.73□□□□□ -2.29
AP004242.1-201ENST00000533701 SPRR2BP35325 72 aa0.73□□□□□ -2.29
AP004242.1-201ENST00000533701 KRTAP19-5Q3LI72 72 aa0.73□□□□□ -2.29
AP004242.1-201ENST00000533701 KMT2DO14686 5537 aa0.73□□□□□ -2.29
AP004242.1-201ENST00000533701 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
AP004242.1-201ENST00000533701 MT2AP02795 61 aa0.71□□□□□ -2.3
AP004242.1-201ENST00000533701 MT1FP04733 61 aa0.71□□□□□ -2.3
AP004242.1-201ENST00000533701 MT1AP04731 61 aa0.7□□□□□ -2.3
AP004242.1-201ENST00000533701 MT1HP80294 61 aa0.69□□□□□ -2.3
AP004242.1-201ENST00000533701 KRTAP20-1Q3LI63 56 aa0.69□□□□□ -2.3
AP004242.1-201ENST00000533701 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
AP004242.1-201ENST00000533701 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
AP004242.1-201ENST00000533701 MUC17Q685J3 4493 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 LRP2P98164 4655 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 MT1EP04732 61 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 SPRR2AP35326 72 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 MT1LQ93083 61 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 USH2AO75445 5202 aa0.67□□□□□ -2.3
AP004242.1-201ENST00000533701 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
AP004242.1-201ENST00000533701 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
AP004242.1-201ENST00000533701 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
AP004242.1-201ENST00000533701 MT1GP13640 62 aa0.61□□□□□ -2.31
AP004242.1-201ENST00000533701 MDN1Q9NU22 5596 aa0.61□□□□□ -2.31
AP004242.1-201ENST00000533701 MT1MQ8N339 61 aa0.6□□□□□ -2.31
AP004242.1-201ENST00000533701 SPRR2EP22531 72 aa0.59□□□□□ -2.31
AP004242.1-201ENST00000533701 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
AP004242.1-201ENST00000533701 KRTAP5-10Q6L8G5 202 aa0.58□□□□□ -2.32
AP004242.1-201ENST00000533701 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
AP004242.1-201ENST00000533701 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
AP004242.1-201ENST00000533701 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
AP004242.1-201ENST00000533701 KRTAP19-6Q3LI70 58 aa0.52□□□□□ -2.33
AP004242.1-201ENST00000533701 MT4P47944 62 aa0.4□□□□□ -2.35
AP004242.1-201ENST00000533701 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
AP004242.1-201ENST00000533701 KRTAP20-2Q3LI61 65 aa0.36□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 104 ms