RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
ATG13-220ENST00000533316 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
ATG13-220ENST00000533316 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
ATG13-220ENST00000533316 R4GN34 69 aa4.12□□□□□ -1.75
ATG13-220ENST00000533316 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
ATG13-220ENST00000533316 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
ATG13-220ENST00000533316 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
ATG13-220ENST00000533316 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
ATG13-220ENST00000533316 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
ATG13-220ENST00000533316 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
ATG13-220ENST00000533316 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
ATG13-220ENST00000533316 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
ATG13-220ENST00000533316 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
ATG13-220ENST00000533316 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
ATG13-220ENST00000533316 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
ATG13-220ENST00000533316 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
ATG13-220ENST00000533316 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
ATG13-220ENST00000533316 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
ATG13-220ENST00000533316 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
ATG13-220ENST00000533316 MT4P47944 62 aa3.85□□□□□ -1.79
ATG13-220ENST00000533316 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
ATG13-220ENST00000533316 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
ATG13-220ENST00000533316 TNP1P09430 55 aa3.83□□□□□ -1.8
ATG13-220ENST00000533316 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
ATG13-220ENST00000533316 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
ATG13-220ENST00000533316 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
ATG13-220ENST00000533316 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
ATG13-220ENST00000533316 MT1EP04732 61 aa3.8□□□□□ -1.8
ATG13-220ENST00000533316 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
ATG13-220ENST00000533316 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
ATG13-220ENST00000533316 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
ATG13-220ENST00000533316 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
ATG13-220ENST00000533316 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
ATG13-220ENST00000533316 MT1GP13640 62 aa3.66□□□□□ -1.82
ATG13-220ENST00000533316 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
ATG13-220ENST00000533316 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
ATG13-220ENST00000533316 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
ATG13-220ENST00000533316 MT1MQ8N339 61 aa3.64□□□□□ -1.83
ATG13-220ENST00000533316 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
ATG13-220ENST00000533316 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
ATG13-220ENST00000533316 MT1LQ93083 61 aa3.57□□□□□ -1.84
ATG13-220ENST00000533316 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
ATG13-220ENST00000533316 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
ATG13-220ENST00000533316 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
ATG13-220ENST00000533316 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
ATG13-220ENST00000533316 INE1O15225 51 aa3.41□□□□□ -1.86
ATG13-220ENST00000533316 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
ATG13-220ENST00000533316 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
ATG13-220ENST00000533316 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
ATG13-220ENST00000533316 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
ATG13-220ENST00000533316 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
ATG13-220ENST00000533316 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
ATG13-220ENST00000533316 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
ATG13-220ENST00000533316 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
ATG13-220ENST00000533316 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
ATG13-220ENST00000533316 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
ATG13-220ENST00000533316 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
ATG13-220ENST00000533316 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
ATG13-220ENST00000533316 MT1AP04731 61 aa3.01□□□□□ -1.93
ATG13-220ENST00000533316 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
ATG13-220ENST00000533316 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
ATG13-220ENST00000533316 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
ATG13-220ENST00000533316 MT3P25713 68 aa2.75□□□□□ -1.97
ATG13-220ENST00000533316 LCE1EQ5T753 118 aa2.56□□□□□ -2
ATG13-220ENST00000533316 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
ATG13-220ENST00000533316 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
ATG13-220ENST00000533316 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
ATG13-220ENST00000533316 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
ATG13-220ENST00000533316 PRM1P04553 51 aa2.32□□□□□ -2.04
ATG13-220ENST00000533316 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
ATG13-220ENST00000533316 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
ATG13-220ENST00000533316 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
ATG13-220ENST00000533316 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
ATG13-220ENST00000533316 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
ATG13-220ENST00000533316 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
ATG13-220ENST00000533316 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
ATG13-220ENST00000533316 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
ATG13-220ENST00000533316 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 119.2 ms