RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 KRTAP19-7Q3SYF9 63 aa8.58□□□□□ -1.04
PKP3-210ENST00000533249 KRTAP19-3Q7Z4W3 81 aa8.54□□□□□ -1.04
PKP3-210ENST00000533249 MT1EP04732 61 aa8.53□□□□□ -1.04
PKP3-210ENST00000533249 C10orf95Q9H7T3 257 aa8.44□□□□□ -1.06
PKP3-210ENST00000533249 TNP1P09430 55 aa8.37□□□□□ -1.07
PKP3-210ENST00000533249 ROMO1P60602 79 aa8.32□□□□□ -1.08
PKP3-210ENST00000533249 LCE1DQ5T752 114 aa8.32□□□□□ -1.08
PKP3-210ENST00000533249 KRTAP19-5Q3LI72 72 aa8.29□□□□□ -1.08
PKP3-210ENST00000533249 MT1GP13640 62 aa8.28□□□□□ -1.08
PKP3-210ENST00000533249 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
PKP3-210ENST00000533249 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
PKP3-210ENST00000533249 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
PKP3-210ENST00000533249 MT4P47944 62 aa8.21□□□□□ -1.1
PKP3-210ENST00000533249 PMAIP1Q13794 54 aa8.21□□□□□ -1.1
PKP3-210ENST00000533249 LCE4AQ5TA78 99 aa8.19□□□□□ -1.1
PKP3-210ENST00000533249 HMCN1Q96RW7 5635 aa8.16□□□□□ -1.1
PKP3-210ENST00000533249 MT1MQ8N339 61 aa8.16□□□□□ -1.1
PKP3-210ENST00000533249 MT1LQ93083 61 aa8.1□□□□□ -1.11
PKP3-210ENST00000533249 KRTAP4-3Q9BYR4 195 aa8.02□□□□□ -1.13
PKP3-210ENST00000533249 AHNAK2Q8IVF2 5795 aa8.02□□□□□ -1.13
PKP3-210ENST00000533249 LCE3AQ5TA76 89 aa8□□□□□ -1.13
PKP3-210ENST00000533249 KRTAP5-4Q6L8H1 288 aa7.96□□□□□ -1.14
PKP3-210ENST00000533249 KRTAP4-6Q9BYQ5 205 aa7.92□□□□□ -1.14
PKP3-210ENST00000533249 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
PKP3-210ENST00000533249 KRTAP5-10Q6L8G5 202 aa7.89□□□□□ -1.15
PKP3-210ENST00000533249 KRTAP12-3P60328 96 aa7.73□□□□□ -1.17
PKP3-210ENST00000533249 KRTAP4-7Q9BYR0 210 aa7.72□□□□□ -1.17
PKP3-210ENST00000533249 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
PKP3-210ENST00000533249 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
PKP3-210ENST00000533249 KRTAP5-3Q6L8H2 238 aa7.65□□□□□ -1.18
PKP3-210ENST00000533249 KRTAP5-7Q6L8G8 165 aa7.62□□□□□ -1.19
PKP3-210ENST00000533249 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
PKP3-210ENST00000533249 KRTAP5-5Q701N2 237 aaPredicted RBP7.48□□□□□ -1.21
PKP3-210ENST00000533249 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
PKP3-210ENST00000533249 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.22
PKP3-210ENST00000533249 KRTAP12-4P60329 112 aa7.4□□□□□ -1.22
PKP3-210ENST00000533249 SVIPQ8NHG7 77 aa7.38□□□□□ -1.23
PKP3-210ENST00000533249 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
PKP3-210ENST00000533249 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
PKP3-210ENST00000533249 SYNE1Q8NF91 8797 aaKnown RBP7.27□□□□□ -1.25
PKP3-210ENST00000533249 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
PKP3-210ENST00000533249 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
PKP3-210ENST00000533249 KRTAP5-2Q701N4 177 aa6.91□□□□□ -1.3
PKP3-210ENST00000533249 MT1AP04731 61 aa6.88□□□□□ -1.31
PKP3-210ENST00000533249 KRTAP6-1Q3LI64 71 aa6.88□□□□□ -1.31
PKP3-210ENST00000533249 KRTAP5-8O75690 187 aa6.76□□□□□ -1.33
PKP3-210ENST00000533249 AHNAKQ09666 5890 aaKnown RBP6.68□□□□□ -1.34
PKP3-210ENST00000533249 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
PKP3-210ENST00000533249 MUC5ACP98088 5654 aa6.67□□□□□ -1.34
PKP3-210ENST00000533249 KRTAP9-6A8MVA2 160 aa6.66□□□□□ -1.34
PKP3-210ENST00000533249 KRTAP6-2Q3LI66 62 aa6.65□□□□□ -1.34
PKP3-210ENST00000533249 MUC5BQ9HC84 5762 aaPredicted RBP6.62□□□□□ -1.35
PKP3-210ENST00000533249 OBSCNQ5VST9 7968 aa6.59□□□□□ -1.35
PKP3-210ENST00000533249 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
PKP3-210ENST00000533249 LUZP6Q538Z0 58 aa6.47□□□□□ -1.37
PKP3-210ENST00000533249 MT3P25713 68 aa6.31□□□□□ -1.4
PKP3-210ENST00000533249 KRTAP5-1Q6L8H4 278 aa6.27□□□□□ -1.41
PKP3-210ENST00000533249 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
PKP3-210ENST00000533249 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
PKP3-210ENST00000533249 LCE1BQ5T7P3 118 aa5.62□□□□□ -1.51
PKP3-210ENST00000533249 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
PKP3-210ENST00000533249 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
PKP3-210ENST00000533249 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
PKP3-210ENST00000533249 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
PKP3-210ENST00000533249 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
PKP3-210ENST00000533249 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
PKP3-210ENST00000533249 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
PKP3-210ENST00000533249 INE1O15225 51 aa4.89□□□□□ -1.63
PKP3-210ENST00000533249 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
PKP3-210ENST00000533249 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
PKP3-210ENST00000533249 H3BS24 57 aa4.73□□□□□ -1.65
PKP3-210ENST00000533249 PHGR1C9JFL3 82 aa4.64□□□□□ -1.67
PKP3-210ENST00000533249 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
PKP3-210ENST00000533249 PRM1P04553 51 aa4.3□□□□□ -1.72
PKP3-210ENST00000533249 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
PKP3-210ENST00000533249 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
PKP3-210ENST00000533249 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
PKP3-210ENST00000533249 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms