RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
PKP3-209ENST00000533069 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
PKP3-209ENST00000533069 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
PKP3-209ENST00000533069 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
PKP3-209ENST00000533069 MT1EP04732 61 aa6.2□□□□□ -1.42
PKP3-209ENST00000533069 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
PKP3-209ENST00000533069 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
PKP3-209ENST00000533069 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.42
PKP3-209ENST00000533069 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
PKP3-209ENST00000533069 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
PKP3-209ENST00000533069 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
PKP3-209ENST00000533069 MT1GP13640 62 aa6.02□□□□□ -1.45
PKP3-209ENST00000533069 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
PKP3-209ENST00000533069 MT1LQ93083 61 aa5.93□□□□□ -1.46
PKP3-209ENST00000533069 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
PKP3-209ENST00000533069 MT1MQ8N339 61 aa5.9□□□□□ -1.46
PKP3-209ENST00000533069 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
PKP3-209ENST00000533069 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
PKP3-209ENST00000533069 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
PKP3-209ENST00000533069 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
PKP3-209ENST00000533069 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
PKP3-209ENST00000533069 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
PKP3-209ENST00000533069 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
PKP3-209ENST00000533069 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
PKP3-209ENST00000533069 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
PKP3-209ENST00000533069 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.51
PKP3-209ENST00000533069 MT4P47944 62 aa5.61□□□□□ -1.51
PKP3-209ENST00000533069 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
PKP3-209ENST00000533069 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
PKP3-209ENST00000533069 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
PKP3-209ENST00000533069 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
PKP3-209ENST00000533069 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
PKP3-209ENST00000533069 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
PKP3-209ENST00000533069 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
PKP3-209ENST00000533069 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
PKP3-209ENST00000533069 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
PKP3-209ENST00000533069 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
PKP3-209ENST00000533069 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
PKP3-209ENST00000533069 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
PKP3-209ENST00000533069 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
PKP3-209ENST00000533069 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
PKP3-209ENST00000533069 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
PKP3-209ENST00000533069 MT1AP04731 61 aa5.06□□□□□ -1.6
PKP3-209ENST00000533069 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
PKP3-209ENST00000533069 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
PKP3-209ENST00000533069 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
PKP3-209ENST00000533069 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
PKP3-209ENST00000533069 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
PKP3-209ENST00000533069 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
PKP3-209ENST00000533069 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
PKP3-209ENST00000533069 MT3P25713 68 aa4.64□□□□□ -1.67
PKP3-209ENST00000533069 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
PKP3-209ENST00000533069 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
PKP3-209ENST00000533069 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
PKP3-209ENST00000533069 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
PKP3-209ENST00000533069 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
PKP3-209ENST00000533069 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PKP3-209ENST00000533069 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
PKP3-209ENST00000533069 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
PKP3-209ENST00000533069 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
PKP3-209ENST00000533069 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
PKP3-209ENST00000533069 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
PKP3-209ENST00000533069 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
PKP3-209ENST00000533069 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
PKP3-209ENST00000533069 INE1O15225 51 aa3.95□□□□□ -1.78
PKP3-209ENST00000533069 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
PKP3-209ENST00000533069 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
PKP3-209ENST00000533069 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
PKP3-209ENST00000533069 H3BS24 57 aa3.57□□□□□ -1.84
PKP3-209ENST00000533069 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
PKP3-209ENST00000533069 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
PKP3-209ENST00000533069 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
PKP3-209ENST00000533069 PRM1P04553 51 aa3.28□□□□□ -1.88
PKP3-209ENST00000533069 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PKP3-209ENST00000533069 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
PKP3-209ENST00000533069 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
PKP3-209ENST00000533069 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
PKP3-209ENST00000533069 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms