RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 KRTAP4-8A0A0G2JLE6 195 aa7.69□□□□□ -1.18
CHID1-220ENST00000532909 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
CHID1-220ENST00000532909 SPRR2DP22532 72 aa7.65□□□□□ -1.18
CHID1-220ENST00000532909 KRTAP2-2Q9BYT5 123 aa7.65□□□□□ -1.18
CHID1-220ENST00000532909 KRTAP2-1Q9BYU5 128 aa7.65□□□□□ -1.18
CHID1-220ENST00000532909 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
CHID1-220ENST00000532909 PRAC1Q96KF2 57 aa7.48□□□□□ -1.21
CHID1-220ENST00000532909 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
CHID1-220ENST00000532909 KRTAP12-3P60328 96 aa7.4□□□□□ -1.22
CHID1-220ENST00000532909 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
CHID1-220ENST00000532909 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
CHID1-220ENST00000532909 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
CHID1-220ENST00000532909 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
CHID1-220ENST00000532909 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
CHID1-220ENST00000532909 MT1EP04732 61 aa7.25□□□□□ -1.25
CHID1-220ENST00000532909 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
CHID1-220ENST00000532909 DSTQ03001 7570 aaKnown RBP7.14□□□□□ -1.27
CHID1-220ENST00000532909 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
CHID1-220ENST00000532909 KRTAP19-3Q7Z4W3 81 aa7.07□□□□□ -1.28
CHID1-220ENST00000532909 GPR98Q8WXG9 6306 aa7.07□□□□□ -1.28
CHID1-220ENST00000532909 MT1LQ93083 61 aa7.06□□□□□ -1.28
CHID1-220ENST00000532909 MT1GP13640 62 aa7.04□□□□□ -1.28
CHID1-220ENST00000532909 KRTAP4-9Q9BYQ8 210 aa7.01□□□□□ -1.29
CHID1-220ENST00000532909 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
CHID1-220ENST00000532909 MT1MQ8N339 61 aa6.83□□□□□ -1.32
CHID1-220ENST00000532909 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
CHID1-220ENST00000532909 MT4P47944 62 aa6.73□□□□□ -1.33
CHID1-220ENST00000532909 LCE4AQ5TA78 99 aa6.71□□□□□ -1.34
CHID1-220ENST00000532909 HMCN1Q96RW7 5635 aa6.69□□□□□ -1.34
CHID1-220ENST00000532909 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
CHID1-220ENST00000532909 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
CHID1-220ENST00000532909 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
CHID1-220ENST00000532909 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
CHID1-220ENST00000532909 KRTAP5-4Q6L8H1 288 aa6.51□□□□□ -1.37
CHID1-220ENST00000532909 LUZP6Q538Z0 58 aa6.48□□□□□ -1.37
CHID1-220ENST00000532909 KRTAP5-10Q6L8G5 202 aa6.39□□□□□ -1.39
CHID1-220ENST00000532909 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
CHID1-220ENST00000532909 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
CHID1-220ENST00000532909 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
CHID1-220ENST00000532909 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
CHID1-220ENST00000532909 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
CHID1-220ENST00000532909 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
CHID1-220ENST00000532909 MT1AP04731 61 aa6.07□□□□□ -1.44
CHID1-220ENST00000532909 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
CHID1-220ENST00000532909 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
CHID1-220ENST00000532909 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
CHID1-220ENST00000532909 NDUFAF8A1L188 74 aa5.9□□□□□ -1.46
CHID1-220ENST00000532909 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
CHID1-220ENST00000532909 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
CHID1-220ENST00000532909 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
CHID1-220ENST00000532909 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
CHID1-220ENST00000532909 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
CHID1-220ENST00000532909 MT3P25713 68 aa5.57□□□□□ -1.52
CHID1-220ENST00000532909 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
CHID1-220ENST00000532909 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
CHID1-220ENST00000532909 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
CHID1-220ENST00000532909 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.54
CHID1-220ENST00000532909 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
CHID1-220ENST00000532909 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
CHID1-220ENST00000532909 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
CHID1-220ENST00000532909 H3BS24 57 aa5.31□□□□□ -1.56
CHID1-220ENST00000532909 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
CHID1-220ENST00000532909 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
CHID1-220ENST00000532909 INE1O15225 51 aa5.08□□□□□ -1.6
CHID1-220ENST00000532909 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
CHID1-220ENST00000532909 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
CHID1-220ENST00000532909 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
CHID1-220ENST00000532909 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
CHID1-220ENST00000532909 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
CHID1-220ENST00000532909 PRM1P04553 51 aa4.14□□□□□ -1.75
CHID1-220ENST00000532909 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
CHID1-220ENST00000532909 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CHID1-220ENST00000532909 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
CHID1-220ENST00000532909 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
CHID1-220ENST00000532909 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
CHID1-220ENST00000532909 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
CHID1-220ENST00000532909 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
CHID1-220ENST00000532909 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 57.5 ms