RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CASP4-210ENST00000531546 SPRR2DP22532 72 aa2.22□□□□□ -2.05
CASP4-210ENST00000531546 CASC2Q6XLA1 102 aa2.22□□□□□ -2.05
CASP4-210ENST00000531546 WFDC13Q8IUB5 93 aa2.22□□□□□ -2.05
CASP4-210ENST00000531546 TMEM254Q8TBM7 123 aa2.22□□□□□ -2.05
CASP4-210ENST00000531546 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
CASP4-210ENST00000531546 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
CASP4-210ENST00000531546 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
CASP4-210ENST00000531546 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
CASP4-210ENST00000531546 MRPL34Q9BQ48 92 aaKnown RBP2.21□□□□□ -2.06
CASP4-210ENST00000531546 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
CASP4-210ENST00000531546 MMP24-AS1A0A0U1RRL7 71 aa2.2□□□□□ -2.06
CASP4-210ENST00000531546 H1FX-AS1Q4G0G2 97 aa2.2□□□□□ -2.06
CASP4-210ENST00000531546 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
CASP4-210ENST00000531546 K7EQZ3 153 aa2.19□□□□□ -2.06
CASP4-210ENST00000531546 TRAV22A0A0B4J277 110 aa2.18□□□□□ -2.06
CASP4-210ENST00000531546 Q5VV11 94 aa2.18□□□□□ -2.06
CASP4-210ENST00000531546 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
CASP4-210ENST00000531546 CYP4F30PQ9H0H9 118 aa2.17□□□□□ -2.06
CASP4-210ENST00000531546 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
CASP4-210ENST00000531546 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
CASP4-210ENST00000531546 A0A087WVE0 104 aa2.14□□□□□ -2.07
CASP4-210ENST00000531546 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
CASP4-210ENST00000531546 ATP5EP2Q5VTU8 51 aa2.14□□□□□ -2.07
CASP4-210ENST00000531546 UBL5Q9BZL1 73 aa2.14□□□□□ -2.07
CASP4-210ENST00000531546 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
CASP4-210ENST00000531546 SNURFQ9Y675 71 aa2.13□□□□□ -2.07
CASP4-210ENST00000531546 CSAG1Q6PB30 78 aa2.11□□□□□ -2.07
CASP4-210ENST00000531546 TP53AIP1Q9HCN2 124 aa2.11□□□□□ -2.07
CASP4-210ENST00000531546 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
CASP4-210ENST00000531546 S4R3F8 94 aa2.1□□□□□ -2.07
CASP4-210ENST00000531546 PRR15LQ9BU68 103 aa2.07□□□□□ -2.08
CASP4-210ENST00000531546 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
CASP4-210ENST00000531546 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
CASP4-210ENST00000531546 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
CASP4-210ENST00000531546 MT1BP07438 61 aa2.05□□□□□ -2.08
CASP4-210ENST00000531546 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
CASP4-210ENST00000531546 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
CASP4-210ENST00000531546 CRIPTQ9P021 101 aa2.04□□□□□ -2.08
CASP4-210ENST00000531546 LINC01558Q9Y6Z2 57 aa2.01□□□□□ -2.09
CASP4-210ENST00000531546 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
CASP4-210ENST00000531546 H0Y9P7 68 aa2□□□□□ -2.09
CASP4-210ENST00000531546 H0YAA0 97 aa2□□□□□ -2.09
CASP4-210ENST00000531546 MT4P47944 62 aa2□□□□□ -2.09
CASP4-210ENST00000531546 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
CASP4-210ENST00000531546 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
CASP4-210ENST00000531546 INE1O15225 51 aa1.94□□□□□ -2.1
CASP4-210ENST00000531546 COA5Q86WW8 74 aa1.94□□□□□ -2.1
CASP4-210ENST00000531546 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
CASP4-210ENST00000531546 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
CASP4-210ENST00000531546 MT1XP80297 61 aa1.91□□□□□ -2.1
CASP4-210ENST00000531546 M0QZ58 72 aa1.9□□□□□ -2.11
CASP4-210ENST00000531546 UQCR11O14957 56 aa1.9□□□□□ -2.11
CASP4-210ENST00000531546 ACYP2P14621 99 aa1.88□□□□□ -2.11
CASP4-210ENST00000531546 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CASP4-210ENST00000531546 MUC5ACP98088 5654 aa1.84□□□□□ -2.12
CASP4-210ENST00000531546 A0A1B0GU69 56 aa1.82□□□□□ -2.12
CASP4-210ENST00000531546 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
CASP4-210ENST00000531546 A0A0D9SG42 100 aa1.72□□□□□ -2.13
CASP4-210ENST00000531546 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
CASP4-210ENST00000531546 MT1EP04732 61 aa1.7□□□□□ -2.14
CASP4-210ENST00000531546 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
CASP4-210ENST00000531546 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
CASP4-210ENST00000531546 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
CASP4-210ENST00000531546 MT1GP13640 62 aa1.66□□□□□ -2.14
CASP4-210ENST00000531546 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
CASP4-210ENST00000531546 TNP1P09430 55 aa1.63□□□□□ -2.15
CASP4-210ENST00000531546 MT1MQ8N339 61 aa1.62□□□□□ -2.15
CASP4-210ENST00000531546 MT1LQ93083 61 aa1.62□□□□□ -2.15
CASP4-210ENST00000531546 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CASP4-210ENST00000531546 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
CASP4-210ENST00000531546 MT1AP04731 61 aa1.38□□□□□ -2.19
CASP4-210ENST00000531546 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
CASP4-210ENST00000531546 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
CASP4-210ENST00000531546 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CASP4-210ENST00000531546 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
CASP4-210ENST00000531546 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CASP4-210ENST00000531546 PRM1P04553 51 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 43.3 ms