RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 KRTAP19-3Q7Z4W3 81 aa7.5□□□□□ -1.21
HIPK3-205ENST00000531504 HMCN1Q96RW7 5635 aa7.47□□□□□ -1.21
HIPK3-205ENST00000531504 MT4P47944 62 aa7.47□□□□□ -1.21
HIPK3-205ENST00000531504 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
HIPK3-205ENST00000531504 KRTAP5-10Q6L8G5 202 aa7.45□□□□□ -1.22
HIPK3-205ENST00000531504 BRK1Q8WUW1 75 aa7.44□□□□□ -1.22
HIPK3-205ENST00000531504 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
HIPK3-205ENST00000531504 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
HIPK3-205ENST00000531504 MT1EP04732 61 aa7.4□□□□□ -1.22
HIPK3-205ENST00000531504 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
HIPK3-205ENST00000531504 KRTAP5-7Q6L8G8 165 aa7.27□□□□□ -1.25
HIPK3-205ENST00000531504 MT1GP13640 62 aa7.26□□□□□ -1.25
HIPK3-205ENST00000531504 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
HIPK3-205ENST00000531504 TNP1P09430 55 aa7.18□□□□□ -1.26
HIPK3-205ENST00000531504 KRTAP5-4Q6L8H1 288 aa7.17□□□□□ -1.26
HIPK3-205ENST00000531504 ROMO1P60602 79 aa7.16□□□□□ -1.26
HIPK3-205ENST00000531504 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
HIPK3-205ENST00000531504 KRTAP5-3Q6L8H2 238 aa7.12□□□□□ -1.27
HIPK3-205ENST00000531504 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
HIPK3-205ENST00000531504 MT1MQ8N339 61 aa7.1□□□□□ -1.27
HIPK3-205ENST00000531504 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
HIPK3-205ENST00000531504 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
HIPK3-205ENST00000531504 PMAIP1Q13794 54 aa7.03□□□□□ -1.28
HIPK3-205ENST00000531504 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
HIPK3-205ENST00000531504 MT1LQ93083 61 aa6.95□□□□□ -1.3
HIPK3-205ENST00000531504 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
HIPK3-205ENST00000531504 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
HIPK3-205ENST00000531504 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
HIPK3-205ENST00000531504 KRTAP20-2Q3LI61 65 aa6.83□□□□□ -1.32
HIPK3-205ENST00000531504 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
HIPK3-205ENST00000531504 KRTAP12-4P60329 112 aa6.63□□□□□ -1.35
HIPK3-205ENST00000531504 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
HIPK3-205ENST00000531504 PRAC1Q96KF2 57 aa6.6□□□□□ -1.35
HIPK3-205ENST00000531504 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
HIPK3-205ENST00000531504 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
HIPK3-205ENST00000531504 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
HIPK3-205ENST00000531504 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
HIPK3-205ENST00000531504 AHNAKQ09666 5890 aaKnown RBP6.36□□□□□ -1.39
HIPK3-205ENST00000531504 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
HIPK3-205ENST00000531504 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
HIPK3-205ENST00000531504 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
HIPK3-205ENST00000531504 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
HIPK3-205ENST00000531504 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
HIPK3-205ENST00000531504 KRTAP5-8O75690 187 aa6.21□□□□□ -1.42
HIPK3-205ENST00000531504 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
HIPK3-205ENST00000531504 MUC5BQ9HC84 5762 aaPredicted RBP6.19□□□□□ -1.42
HIPK3-205ENST00000531504 KRTAP5-2Q701N4 177 aa6.16□□□□□ -1.42
HIPK3-205ENST00000531504 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
HIPK3-205ENST00000531504 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
HIPK3-205ENST00000531504 MT1AP04731 61 aa5.91□□□□□ -1.46
HIPK3-205ENST00000531504 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
HIPK3-205ENST00000531504 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
HIPK3-205ENST00000531504 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
HIPK3-205ENST00000531504 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
HIPK3-205ENST00000531504 KRTAP5-1Q6L8H4 278 aa5.64□□□□□ -1.51
HIPK3-205ENST00000531504 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
HIPK3-205ENST00000531504 MT3P25713 68 aa5.46□□□□□ -1.54
HIPK3-205ENST00000531504 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
HIPK3-205ENST00000531504 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
HIPK3-205ENST00000531504 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
HIPK3-205ENST00000531504 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
HIPK3-205ENST00000531504 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
HIPK3-205ENST00000531504 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
HIPK3-205ENST00000531504 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
HIPK3-205ENST00000531504 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
HIPK3-205ENST00000531504 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
HIPK3-205ENST00000531504 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
HIPK3-205ENST00000531504 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
HIPK3-205ENST00000531504 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
HIPK3-205ENST00000531504 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
HIPK3-205ENST00000531504 INE1O15225 51 aa4.2□□□□□ -1.74
HIPK3-205ENST00000531504 H3BS24 57 aa4.07□□□□□ -1.76
HIPK3-205ENST00000531504 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
HIPK3-205ENST00000531504 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
HIPK3-205ENST00000531504 PRM1P04553 51 aa3.69□□□□□ -1.82
HIPK3-205ENST00000531504 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
HIPK3-205ENST00000531504 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
HIPK3-205ENST00000531504 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 90.9 ms