RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 ROMO1P60602 79 aa5.03□□□□□ -1.6
SMPD1-206ENST00000531336 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
SMPD1-206ENST00000531336 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
SMPD1-206ENST00000531336 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
SMPD1-206ENST00000531336 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
SMPD1-206ENST00000531336 H3BS24 57 aa4.98□□□□□ -1.61
SMPD1-206ENST00000531336 BRK1Q8WUW1 75 aa4.98□□□□□ -1.61
SMPD1-206ENST00000531336 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
SMPD1-206ENST00000531336 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
SMPD1-206ENST00000531336 MT1LQ93083 61 aa4.95□□□□□ -1.62
SMPD1-206ENST00000531336 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
SMPD1-206ENST00000531336 MT1GP13640 62 aa4.91□□□□□ -1.62
SMPD1-206ENST00000531336 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
SMPD1-206ENST00000531336 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
SMPD1-206ENST00000531336 MT1MQ8N339 61 aa4.86□□□□□ -1.63
SMPD1-206ENST00000531336 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
SMPD1-206ENST00000531336 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SMPD1-206ENST00000531336 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
SMPD1-206ENST00000531336 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
SMPD1-206ENST00000531336 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
SMPD1-206ENST00000531336 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
SMPD1-206ENST00000531336 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
SMPD1-206ENST00000531336 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
SMPD1-206ENST00000531336 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
SMPD1-206ENST00000531336 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
SMPD1-206ENST00000531336 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
SMPD1-206ENST00000531336 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
SMPD1-206ENST00000531336 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
SMPD1-206ENST00000531336 MT4P47944 62 aa4.42□□□□□ -1.7
SMPD1-206ENST00000531336 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
SMPD1-206ENST00000531336 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
SMPD1-206ENST00000531336 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
SMPD1-206ENST00000531336 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SMPD1-206ENST00000531336 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SMPD1-206ENST00000531336 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
SMPD1-206ENST00000531336 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
SMPD1-206ENST00000531336 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
SMPD1-206ENST00000531336 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
SMPD1-206ENST00000531336 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
SMPD1-206ENST00000531336 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
SMPD1-206ENST00000531336 MT1AP04731 61 aa4.21□□□□□ -1.74
SMPD1-206ENST00000531336 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
SMPD1-206ENST00000531336 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
SMPD1-206ENST00000531336 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
SMPD1-206ENST00000531336 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
SMPD1-206ENST00000531336 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
SMPD1-206ENST00000531336 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
SMPD1-206ENST00000531336 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
SMPD1-206ENST00000531336 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SMPD1-206ENST00000531336 MT3P25713 68 aa3.83□□□□□ -1.8
SMPD1-206ENST00000531336 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
SMPD1-206ENST00000531336 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
SMPD1-206ENST00000531336 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
SMPD1-206ENST00000531336 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
SMPD1-206ENST00000531336 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
SMPD1-206ENST00000531336 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
SMPD1-206ENST00000531336 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
SMPD1-206ENST00000531336 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
SMPD1-206ENST00000531336 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
SMPD1-206ENST00000531336 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
SMPD1-206ENST00000531336 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SMPD1-206ENST00000531336 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
SMPD1-206ENST00000531336 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
SMPD1-206ENST00000531336 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
SMPD1-206ENST00000531336 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SMPD1-206ENST00000531336 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SMPD1-206ENST00000531336 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
SMPD1-206ENST00000531336 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
SMPD1-206ENST00000531336 INE1O15225 51 aa2.87□□□□□ -1.95
SMPD1-206ENST00000531336 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SMPD1-206ENST00000531336 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
SMPD1-206ENST00000531336 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SMPD1-206ENST00000531336 PRM1P04553 51 aa2.61□□□□□ -1.99
SMPD1-206ENST00000531336 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SMPD1-206ENST00000531336 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SMPD1-206ENST00000531336 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SMPD1-206ENST00000531336 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SMPD1-206ENST00000531336 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 52.2 ms