RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
CHMP4A-205ENST00000531158 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
CHMP4A-205ENST00000531158 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-205ENST00000531158 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
CHMP4A-205ENST00000531158 A0A0D9SG42 100 aa3.95□□□□□ -1.78
CHMP4A-205ENST00000531158 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
CHMP4A-205ENST00000531158 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
CHMP4A-205ENST00000531158 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
CHMP4A-205ENST00000531158 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
CHMP4A-205ENST00000531158 MT1XP80297 61 aa3.89□□□□□ -1.79
CHMP4A-205ENST00000531158 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
CHMP4A-205ENST00000531158 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
CHMP4A-205ENST00000531158 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
CHMP4A-205ENST00000531158 R4GN34 69 aa3.85□□□□□ -1.79
CHMP4A-205ENST00000531158 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
CHMP4A-205ENST00000531158 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CHMP4A-205ENST00000531158 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
CHMP4A-205ENST00000531158 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
CHMP4A-205ENST00000531158 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
CHMP4A-205ENST00000531158 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
CHMP4A-205ENST00000531158 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
CHMP4A-205ENST00000531158 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CHMP4A-205ENST00000531158 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
CHMP4A-205ENST00000531158 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
CHMP4A-205ENST00000531158 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
CHMP4A-205ENST00000531158 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
CHMP4A-205ENST00000531158 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
CHMP4A-205ENST00000531158 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
CHMP4A-205ENST00000531158 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
CHMP4A-205ENST00000531158 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
CHMP4A-205ENST00000531158 MT4P47944 62 aa3.58□□□□□ -1.84
CHMP4A-205ENST00000531158 TNP1P09430 55 aa3.53□□□□□ -1.84
CHMP4A-205ENST00000531158 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
CHMP4A-205ENST00000531158 MT1EP04732 61 aa3.46□□□□□ -1.86
CHMP4A-205ENST00000531158 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
CHMP4A-205ENST00000531158 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
CHMP4A-205ENST00000531158 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-205ENST00000531158 MT1GP13640 62 aa3.32□□□□□ -1.88
CHMP4A-205ENST00000531158 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
CHMP4A-205ENST00000531158 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
CHMP4A-205ENST00000531158 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
CHMP4A-205ENST00000531158 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
CHMP4A-205ENST00000531158 MT1MQ8N339 61 aa3.3□□□□□ -1.88
CHMP4A-205ENST00000531158 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
CHMP4A-205ENST00000531158 MT1LQ93083 61 aa3.25□□□□□ -1.89
CHMP4A-205ENST00000531158 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
CHMP4A-205ENST00000531158 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
CHMP4A-205ENST00000531158 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-205ENST00000531158 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
CHMP4A-205ENST00000531158 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
CHMP4A-205ENST00000531158 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
CHMP4A-205ENST00000531158 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
CHMP4A-205ENST00000531158 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
CHMP4A-205ENST00000531158 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CHMP4A-205ENST00000531158 MT3P25713 68 aa2.95□□□□□ -1.94
CHMP4A-205ENST00000531158 INE1O15225 51 aa2.89□□□□□ -1.95
CHMP4A-205ENST00000531158 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
CHMP4A-205ENST00000531158 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-205ENST00000531158 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
CHMP4A-205ENST00000531158 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
CHMP4A-205ENST00000531158 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
CHMP4A-205ENST00000531158 MT1AP04731 61 aa2.75□□□□□ -1.97
CHMP4A-205ENST00000531158 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CHMP4A-205ENST00000531158 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
CHMP4A-205ENST00000531158 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CHMP4A-205ENST00000531158 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
CHMP4A-205ENST00000531158 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
CHMP4A-205ENST00000531158 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
CHMP4A-205ENST00000531158 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
CHMP4A-205ENST00000531158 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CHMP4A-205ENST00000531158 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
CHMP4A-205ENST00000531158 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CHMP4A-205ENST00000531158 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CHMP4A-205ENST00000531158 PRM1P04553 51 aa2.08□□□□□ -2.08
CHMP4A-205ENST00000531158 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
CHMP4A-205ENST00000531158 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CHMP4A-205ENST00000531158 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
CHMP4A-205ENST00000531158 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 148.9 ms