RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
CTSB-219ENST00000530640 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
CTSB-219ENST00000530640 TNP1P09430 55 aa6.1□□□□□ -1.43
CTSB-219ENST00000530640 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
CTSB-219ENST00000530640 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
CTSB-219ENST00000530640 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
CTSB-219ENST00000530640 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.48
CTSB-219ENST00000530640 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
CTSB-219ENST00000530640 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
CTSB-219ENST00000530640 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
CTSB-219ENST00000530640 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
CTSB-219ENST00000530640 MT1EP04732 61 aa5.71□□□□□ -1.5
CTSB-219ENST00000530640 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
CTSB-219ENST00000530640 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
CTSB-219ENST00000530640 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CTSB-219ENST00000530640 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
CTSB-219ENST00000530640 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
CTSB-219ENST00000530640 MT1LQ93083 61 aa5.55□□□□□ -1.52
CTSB-219ENST00000530640 MT1GP13640 62 aa5.53□□□□□ -1.52
CTSB-219ENST00000530640 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
CTSB-219ENST00000530640 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
CTSB-219ENST00000530640 H3BS24 57 aa5.43□□□□□ -1.54
CTSB-219ENST00000530640 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CTSB-219ENST00000530640 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
CTSB-219ENST00000530640 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
CTSB-219ENST00000530640 MT4P47944 62 aa5.38□□□□□ -1.55
CTSB-219ENST00000530640 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
CTSB-219ENST00000530640 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
CTSB-219ENST00000530640 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
CTSB-219ENST00000530640 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
CTSB-219ENST00000530640 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
CTSB-219ENST00000530640 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
CTSB-219ENST00000530640 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
CTSB-219ENST00000530640 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
CTSB-219ENST00000530640 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
CTSB-219ENST00000530640 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
CTSB-219ENST00000530640 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
CTSB-219ENST00000530640 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
CTSB-219ENST00000530640 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
CTSB-219ENST00000530640 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
CTSB-219ENST00000530640 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
CTSB-219ENST00000530640 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
CTSB-219ENST00000530640 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
CTSB-219ENST00000530640 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
CTSB-219ENST00000530640 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
CTSB-219ENST00000530640 MT1AP04731 61 aa4.72□□□□□ -1.65
CTSB-219ENST00000530640 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
CTSB-219ENST00000530640 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
CTSB-219ENST00000530640 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
CTSB-219ENST00000530640 INE1O15225 51 aa4.5□□□□□ -1.69
CTSB-219ENST00000530640 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
CTSB-219ENST00000530640 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
CTSB-219ENST00000530640 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
CTSB-219ENST00000530640 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
CTSB-219ENST00000530640 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.7
CTSB-219ENST00000530640 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
CTSB-219ENST00000530640 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
CTSB-219ENST00000530640 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CTSB-219ENST00000530640 MT3P25713 68 aa4.26□□□□□ -1.73
CTSB-219ENST00000530640 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CTSB-219ENST00000530640 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
CTSB-219ENST00000530640 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
CTSB-219ENST00000530640 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
CTSB-219ENST00000530640 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
CTSB-219ENST00000530640 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
CTSB-219ENST00000530640 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
CTSB-219ENST00000530640 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CTSB-219ENST00000530640 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CTSB-219ENST00000530640 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
CTSB-219ENST00000530640 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CTSB-219ENST00000530640 PRM1P04553 51 aa3.29□□□□□ -1.88
CTSB-219ENST00000530640 PHGR1C9JFL3 82 aa3.09□□□□□ -1.92
CTSB-219ENST00000530640 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
CTSB-219ENST00000530640 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CTSB-219ENST00000530640 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
CTSB-219ENST00000530640 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
CTSB-219ENST00000530640 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms