RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 A0A1B0GU33 70 aa4.53□□□□□ -1.68
CTNND1-224ENST00000530068 R4GN34 69 aa4.52□□□□□ -1.69
CTNND1-224ENST00000530068 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
CTNND1-224ENST00000530068 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
CTNND1-224ENST00000530068 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
CTNND1-224ENST00000530068 M0QZ58 72 aa4.44□□□□□ -1.7
CTNND1-224ENST00000530068 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
CTNND1-224ENST00000530068 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
CTNND1-224ENST00000530068 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
CTNND1-224ENST00000530068 A8MU10 97 aa4.39□□□□□ -1.71
CTNND1-224ENST00000530068 P0C880 135 aa4.39□□□□□ -1.71
CTNND1-224ENST00000530068 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
CTNND1-224ENST00000530068 K7ERS5 55 aa4.38□□□□□ -1.71
CTNND1-224ENST00000530068 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
CTNND1-224ENST00000530068 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
CTNND1-224ENST00000530068 A0A0D9SG42 100 aa4.29□□□□□ -1.72
CTNND1-224ENST00000530068 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
CTNND1-224ENST00000530068 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
CTNND1-224ENST00000530068 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
CTNND1-224ENST00000530068 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
CTNND1-224ENST00000530068 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
CTNND1-224ENST00000530068 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
CTNND1-224ENST00000530068 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
CTNND1-224ENST00000530068 MT1EP04732 61 aa4.15□□□□□ -1.75
CTNND1-224ENST00000530068 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
CTNND1-224ENST00000530068 ROMO1P60602 79 aa4.14□□□□□ -1.75
CTNND1-224ENST00000530068 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
CTNND1-224ENST00000530068 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
CTNND1-224ENST00000530068 MT1GP13640 62 aa4.09□□□□□ -1.75
CTNND1-224ENST00000530068 MT4P47944 62 aa4.09□□□□□ -1.75
CTNND1-224ENST00000530068 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
CTNND1-224ENST00000530068 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
CTNND1-224ENST00000530068 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
CTNND1-224ENST00000530068 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
CTNND1-224ENST00000530068 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
CTNND1-224ENST00000530068 MT1MQ8N339 61 aa3.97□□□□□ -1.77
CTNND1-224ENST00000530068 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
CTNND1-224ENST00000530068 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
CTNND1-224ENST00000530068 MT1LQ93083 61 aa3.91□□□□□ -1.78
CTNND1-224ENST00000530068 TNP1P09430 55 aa3.9□□□□□ -1.79
CTNND1-224ENST00000530068 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
CTNND1-224ENST00000530068 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
CTNND1-224ENST00000530068 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
CTNND1-224ENST00000530068 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
CTNND1-224ENST00000530068 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CTNND1-224ENST00000530068 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
CTNND1-224ENST00000530068 MT3P25713 68 aa3.68□□□□□ -1.82
CTNND1-224ENST00000530068 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
CTNND1-224ENST00000530068 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
CTNND1-224ENST00000530068 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
CTNND1-224ENST00000530068 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
CTNND1-224ENST00000530068 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CTNND1-224ENST00000530068 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
CTNND1-224ENST00000530068 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CTNND1-224ENST00000530068 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CTNND1-224ENST00000530068 MT1AP04731 61 aa3.34□□□□□ -1.87
CTNND1-224ENST00000530068 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
CTNND1-224ENST00000530068 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
CTNND1-224ENST00000530068 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
CTNND1-224ENST00000530068 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CTNND1-224ENST00000530068 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
CTNND1-224ENST00000530068 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
CTNND1-224ENST00000530068 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
CTNND1-224ENST00000530068 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
CTNND1-224ENST00000530068 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
CTNND1-224ENST00000530068 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CTNND1-224ENST00000530068 INE1O15225 51 aa2.96□□□□□ -1.94
CTNND1-224ENST00000530068 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CTNND1-224ENST00000530068 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CTNND1-224ENST00000530068 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CTNND1-224ENST00000530068 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CTNND1-224ENST00000530068 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
CTNND1-224ENST00000530068 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
CTNND1-224ENST00000530068 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
CTNND1-224ENST00000530068 PRM1P04553 51 aa2.13□□□□□ -2.07
CTNND1-224ENST00000530068 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CTNND1-224ENST00000530068 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CTNND1-224ENST00000530068 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 103.8 ms