RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
FDFT1-215ENST00000529464 K7ERS5 55 aa5.31□□□□□ -1.56
FDFT1-215ENST00000529464 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
FDFT1-215ENST00000529464 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
FDFT1-215ENST00000529464 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
FDFT1-215ENST00000529464 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
FDFT1-215ENST00000529464 TNP1P09430 55 aa5.14□□□□□ -1.59
FDFT1-215ENST00000529464 MT1GP13640 62 aa5.14□□□□□ -1.59
FDFT1-215ENST00000529464 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
FDFT1-215ENST00000529464 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
FDFT1-215ENST00000529464 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
FDFT1-215ENST00000529464 MT4P47944 62 aa5.11□□□□□ -1.59
FDFT1-215ENST00000529464 ROMO1P60602 79 aa5.1□□□□□ -1.59
FDFT1-215ENST00000529464 MT1MQ8N339 61 aa5.1□□□□□ -1.59
FDFT1-215ENST00000529464 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
FDFT1-215ENST00000529464 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
FDFT1-215ENST00000529464 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
FDFT1-215ENST00000529464 MT1LQ93083 61 aa5.06□□□□□ -1.6
FDFT1-215ENST00000529464 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
FDFT1-215ENST00000529464 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
FDFT1-215ENST00000529464 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
FDFT1-215ENST00000529464 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
FDFT1-215ENST00000529464 PRO0628Q9UI54 55 aa4.99□□□□□ -1.61
FDFT1-215ENST00000529464 PMAIP1Q13794 54 aa4.96□□□□□ -1.62
FDFT1-215ENST00000529464 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
FDFT1-215ENST00000529464 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.63
FDFT1-215ENST00000529464 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
FDFT1-215ENST00000529464 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
FDFT1-215ENST00000529464 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
FDFT1-215ENST00000529464 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
FDFT1-215ENST00000529464 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
FDFT1-215ENST00000529464 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
FDFT1-215ENST00000529464 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
FDFT1-215ENST00000529464 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
FDFT1-215ENST00000529464 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
FDFT1-215ENST00000529464 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
FDFT1-215ENST00000529464 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
FDFT1-215ENST00000529464 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
FDFT1-215ENST00000529464 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
FDFT1-215ENST00000529464 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
FDFT1-215ENST00000529464 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
FDFT1-215ENST00000529464 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
FDFT1-215ENST00000529464 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
FDFT1-215ENST00000529464 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
FDFT1-215ENST00000529464 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
FDFT1-215ENST00000529464 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
FDFT1-215ENST00000529464 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
FDFT1-215ENST00000529464 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
FDFT1-215ENST00000529464 MT1AP04731 61 aa4.29□□□□□ -1.72
FDFT1-215ENST00000529464 H3BS24 57 aa4.25□□□□□ -1.73
FDFT1-215ENST00000529464 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
FDFT1-215ENST00000529464 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
FDFT1-215ENST00000529464 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
FDFT1-215ENST00000529464 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
FDFT1-215ENST00000529464 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
FDFT1-215ENST00000529464 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
FDFT1-215ENST00000529464 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
FDFT1-215ENST00000529464 MT3P25713 68 aa3.91□□□□□ -1.78
FDFT1-215ENST00000529464 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
FDFT1-215ENST00000529464 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
FDFT1-215ENST00000529464 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
FDFT1-215ENST00000529464 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
FDFT1-215ENST00000529464 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
FDFT1-215ENST00000529464 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
FDFT1-215ENST00000529464 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
FDFT1-215ENST00000529464 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
FDFT1-215ENST00000529464 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
FDFT1-215ENST00000529464 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
FDFT1-215ENST00000529464 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
FDFT1-215ENST00000529464 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
FDFT1-215ENST00000529464 INE1O15225 51 aa2.89□□□□□ -1.95
FDFT1-215ENST00000529464 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
FDFT1-215ENST00000529464 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
FDFT1-215ENST00000529464 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
FDFT1-215ENST00000529464 PRM1P04553 51 aa2.66□□□□□ -1.98
FDFT1-215ENST00000529464 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
FDFT1-215ENST00000529464 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
FDFT1-215ENST00000529464 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms