RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 H0YAA0 97 aa1.85□□□□□ -2.11
CSDE1-212ENST00000529046 UBL5Q9BZL1 73 aa1.85□□□□□ -2.11
CSDE1-212ENST00000529046 COX7CP15954 63 aa1.84□□□□□ -2.11
CSDE1-212ENST00000529046 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
CSDE1-212ENST00000529046 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
CSDE1-212ENST00000529046 COA5Q86WW8 74 aa1.82□□□□□ -2.12
CSDE1-212ENST00000529046 CYP4F30PQ9H0H9 118 aa1.82□□□□□ -2.12
CSDE1-212ENST00000529046 LOC101927531A0A1B0GV80 90 aa1.8□□□□□ -2.12
CSDE1-212ENST00000529046 SPCS1Q9Y6A9 102 aa1.8□□□□□ -2.12
CSDE1-212ENST00000529046 TRAV22A0A0B4J277 110 aa1.79□□□□□ -2.12
CSDE1-212ENST00000529046 NDUFC1O43677 76 aa1.79□□□□□ -2.12
CSDE1-212ENST00000529046 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
CSDE1-212ENST00000529046 A0A087WVE0 104 aa1.77□□□□□ -2.13
CSDE1-212ENST00000529046 K7EP34 96 aa1.77□□□□□ -2.13
CSDE1-212ENST00000529046 ATOX1O00244 68 aa1.77□□□□□ -2.13
CSDE1-212ENST00000529046 MT1XP80297 61 aa1.77□□□□□ -2.13
CSDE1-212ENST00000529046 COL5A1-AS1Q5SY13 56 aa1.77□□□□□ -2.13
CSDE1-212ENST00000529046 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
CSDE1-212ENST00000529046 ACYP1P07311 99 aa1.76□□□□□ -2.13
CSDE1-212ENST00000529046 SPRR2EP22531 72 aa1.76□□□□□ -2.13
CSDE1-212ENST00000529046 SPRR2BP35325 72 aa1.76□□□□□ -2.13
CSDE1-212ENST00000529046 SPRR2AP35326 72 aa1.76□□□□□ -2.13
CSDE1-212ENST00000529046 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
CSDE1-212ENST00000529046 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
CSDE1-212ENST00000529046 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
CSDE1-212ENST00000529046 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
CSDE1-212ENST00000529046 DMAC1Q96GE9 116 aa1.75□□□□□ -2.13
CSDE1-212ENST00000529046 ETDBQ3ZM63 59 aa1.74□□□□□ -2.13
CSDE1-212ENST00000529046 C20orf197Q8N268 126 aa1.74□□□□□ -2.13
CSDE1-212ENST00000529046 INE1O15225 51 aa1.73□□□□□ -2.13
CSDE1-212ENST00000529046 ATP5EP56381 51 aaPredicted RBP1.73□□□□□ -2.13
CSDE1-212ENST00000529046 SPTSSBQ8NFR3 76 aa1.73□□□□□ -2.13
CSDE1-212ENST00000529046 H0Y9P7 68 aa1.72□□□□□ -2.13
CSDE1-212ENST00000529046 SNURFQ9Y675 71 aa1.72□□□□□ -2.13
CSDE1-212ENST00000529046 SPRR2DP22532 72 aa1.7□□□□□ -2.14
CSDE1-212ENST00000529046 M0QZ58 72 aa1.69□□□□□ -2.14
CSDE1-212ENST00000529046 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
CSDE1-212ENST00000529046 LINC00643Q86TS7 51 aa1.69□□□□□ -2.14
CSDE1-212ENST00000529046 LINC00208Q96KT6 92 aa1.69□□□□□ -2.14
CSDE1-212ENST00000529046 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
CSDE1-212ENST00000529046 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
CSDE1-212ENST00000529046 MT-ATP8P03928 68 aa1.66□□□□□ -2.14
CSDE1-212ENST00000529046 ACYP2P14621 99 aa1.64□□□□□ -2.15
CSDE1-212ENST00000529046 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
CSDE1-212ENST00000529046 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
CSDE1-212ENST00000529046 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
CSDE1-212ENST00000529046 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.15
CSDE1-212ENST00000529046 MT1EP04732 61 aa1.58□□□□□ -2.16
CSDE1-212ENST00000529046 MT1GP13640 62 aa1.57□□□□□ -2.16
CSDE1-212ENST00000529046 CHKB-CPT1BH3BT56 60 aa1.56□□□□□ -2.16
CSDE1-212ENST00000529046 SERP2Q8N6R1 65 aa1.54□□□□□ -2.16
CSDE1-212ENST00000529046 A0A0D9SG42 100 aa1.51□□□□□ -2.17
CSDE1-212ENST00000529046 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
CSDE1-212ENST00000529046 MT1MQ8N339 61 aa1.5□□□□□ -2.17
CSDE1-212ENST00000529046 MT1LQ93083 61 aa1.5□□□□□ -2.17
CSDE1-212ENST00000529046 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
CSDE1-212ENST00000529046 H7BZZ5 65 aa1.49□□□□□ -2.17
CSDE1-212ENST00000529046 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
CSDE1-212ENST00000529046 MT4P47944 62 aa1.47□□□□□ -2.17
CSDE1-212ENST00000529046 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.18
CSDE1-212ENST00000529046 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
CSDE1-212ENST00000529046 UQCR11O14957 56 aa1.44□□□□□ -2.18
CSDE1-212ENST00000529046 TNP1P09430 55 aa1.44□□□□□ -2.18
CSDE1-212ENST00000529046 LINC01558Q9Y6Z2 57 aa1.44□□□□□ -2.18
CSDE1-212ENST00000529046 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
CSDE1-212ENST00000529046 A0A1B0GU69 56 aa1.4□□□□□ -2.19
CSDE1-212ENST00000529046 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CSDE1-212ENST00000529046 PRR15LQ9BU68 103 aa1.38□□□□□ -2.19
CSDE1-212ENST00000529046 MT1AP04731 61 aa1.28□□□□□ -2.2
CSDE1-212ENST00000529046 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
CSDE1-212ENST00000529046 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
CSDE1-212ENST00000529046 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
CSDE1-212ENST00000529046 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
CSDE1-212ENST00000529046 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
CSDE1-212ENST00000529046 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CSDE1-212ENST00000529046 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
CSDE1-212ENST00000529046 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
CSDE1-212ENST00000529046 PRM1P04553 51 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 24.2 ms