RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
SSBP3-212ENST00000528930 ADM2Q7Z4H4 148 aa3.98□□□□□ -1.77
SSBP3-212ENST00000528930 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
SSBP3-212ENST00000528930 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
SSBP3-212ENST00000528930 ROMO1P60602 79 aa3.91□□□□□ -1.78
SSBP3-212ENST00000528930 S4R3F8 94 aa3.89□□□□□ -1.79
SSBP3-212ENST00000528930 SPRR2DP22532 72 aa3.88□□□□□ -1.79
SSBP3-212ENST00000528930 K7ERS5 55 aa3.87□□□□□ -1.79
SSBP3-212ENST00000528930 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
SSBP3-212ENST00000528930 A0A1B0GU33 70 aa3.85□□□□□ -1.79
SSBP3-212ENST00000528930 H0YAA0 97 aa3.83□□□□□ -1.8
SSBP3-212ENST00000528930 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
SSBP3-212ENST00000528930 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
SSBP3-212ENST00000528930 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
SSBP3-212ENST00000528930 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
SSBP3-212ENST00000528930 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
SSBP3-212ENST00000528930 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
SSBP3-212ENST00000528930 MT1BP07438 61 aa3.77□□□□□ -1.81
SSBP3-212ENST00000528930 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
SSBP3-212ENST00000528930 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SSBP3-212ENST00000528930 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SSBP3-212ENST00000528930 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
SSBP3-212ENST00000528930 P0C880 135 aa3.7□□□□□ -1.82
SSBP3-212ENST00000528930 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
SSBP3-212ENST00000528930 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
SSBP3-212ENST00000528930 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SSBP3-212ENST00000528930 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
SSBP3-212ENST00000528930 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
SSBP3-212ENST00000528930 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
SSBP3-212ENST00000528930 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
SSBP3-212ENST00000528930 R4GN34 69 aa3.55□□□□□ -1.84
SSBP3-212ENST00000528930 MT1XP80297 61 aa3.54□□□□□ -1.84
SSBP3-212ENST00000528930 M0QZ58 72 aa3.53□□□□□ -1.84
SSBP3-212ENST00000528930 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
SSBP3-212ENST00000528930 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
SSBP3-212ENST00000528930 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
SSBP3-212ENST00000528930 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
SSBP3-212ENST00000528930 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
SSBP3-212ENST00000528930 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
SSBP3-212ENST00000528930 MT4P47944 62 aa3.45□□□□□ -1.86
SSBP3-212ENST00000528930 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
SSBP3-212ENST00000528930 A0A0D9SG42 100 aa3.43□□□□□ -1.86
SSBP3-212ENST00000528930 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
SSBP3-212ENST00000528930 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
SSBP3-212ENST00000528930 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
SSBP3-212ENST00000528930 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
SSBP3-212ENST00000528930 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
SSBP3-212ENST00000528930 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
SSBP3-212ENST00000528930 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SSBP3-212ENST00000528930 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
SSBP3-212ENST00000528930 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SSBP3-212ENST00000528930 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
SSBP3-212ENST00000528930 MT1EP04732 61 aa3.13□□□□□ -1.91
SSBP3-212ENST00000528930 INE1O15225 51 aa3.09□□□□□ -1.91
SSBP3-212ENST00000528930 TNP1P09430 55 aa3.09□□□□□ -1.91
SSBP3-212ENST00000528930 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
SSBP3-212ENST00000528930 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
SSBP3-212ENST00000528930 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
SSBP3-212ENST00000528930 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
SSBP3-212ENST00000528930 MT1GP13640 62 aa3.03□□□□□ -1.92
SSBP3-212ENST00000528930 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SSBP3-212ENST00000528930 MT1LQ93083 61 aa3□□□□□ -1.93
SSBP3-212ENST00000528930 MT1MQ8N339 61 aa2.98□□□□□ -1.93
SSBP3-212ENST00000528930 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
SSBP3-212ENST00000528930 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
SSBP3-212ENST00000528930 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
SSBP3-212ENST00000528930 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
SSBP3-212ENST00000528930 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SSBP3-212ENST00000528930 MT1AP04731 61 aa2.55□□□□□ -2
SSBP3-212ENST00000528930 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
SSBP3-212ENST00000528930 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
SSBP3-212ENST00000528930 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
SSBP3-212ENST00000528930 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
SSBP3-212ENST00000528930 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SSBP3-212ENST00000528930 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SSBP3-212ENST00000528930 PRM1P04553 51 aa1.94□□□□□ -2.1
SSBP3-212ENST00000528930 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SSBP3-212ENST00000528930 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 193.8 ms