RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 HTN3P15516 51 aa1.63□□□□□ -2.15
PTPN22-207ENST00000528414 SPINK1P00995 79 aa1.63□□□□□ -2.15
PTPN22-207ENST00000528414 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
PTPN22-207ENST00000528414 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
PTPN22-207ENST00000528414 KRTAP12-1P59990 96 aa1.6□□□□□ -2.15
PTPN22-207ENST00000528414 KRTAP2-1Q9BYU5 128 aa1.6□□□□□ -2.15
PTPN22-207ENST00000528414 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
PTPN22-207ENST00000528414 A0A096LNI7 61 aa1.57□□□□□ -2.16
PTPN22-207ENST00000528414 A0A0D9SG42 100 aa1.57□□□□□ -2.16
PTPN22-207ENST00000528414 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
PTPN22-207ENST00000528414 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
PTPN22-207ENST00000528414 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
PTPN22-207ENST00000528414 KRTAP10-10P60014 251 aa1.54□□□□□ -2.16
PTPN22-207ENST00000528414 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
PTPN22-207ENST00000528414 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
PTPN22-207ENST00000528414 MT2AP02795 61 aa1.51□□□□□ -2.17
PTPN22-207ENST00000528414 KRTAP10-5P60370 271 aa1.5□□□□□ -2.17
PTPN22-207ENST00000528414 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
PTPN22-207ENST00000528414 OBSCNQ5VST9 7968 aa1.48□□□□□ -2.17
PTPN22-207ENST00000528414 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
PTPN22-207ENST00000528414 SMR3BP02814 79 aaPredicted RBP1.47□□□□□ -2.17
PTPN22-207ENST00000528414 LCE4AQ5TA78 99 aa1.46□□□□□ -2.18
PTPN22-207ENST00000528414 SPRR2GQ9BYE4 73 aa1.46□□□□□ -2.18
PTPN22-207ENST00000528414 KMT2DO14686 5537 aa1.45□□□□□ -2.18
PTPN22-207ENST00000528414 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
PTPN22-207ENST00000528414 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
PTPN22-207ENST00000528414 MT1FP04733 61 aa1.44□□□□□ -2.18
PTPN22-207ENST00000528414 LCE3CQ5T5A8 94 aa1.44□□□□□ -2.18
PTPN22-207ENST00000528414 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
PTPN22-207ENST00000528414 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
PTPN22-207ENST00000528414 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
PTPN22-207ENST00000528414 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
PTPN22-207ENST00000528414 M0QZ58 72 aa1.38□□□□□ -2.19
PTPN22-207ENST00000528414 MT1BP07438 61 aa1.37□□□□□ -2.19
PTPN22-207ENST00000528414 KRTAP10-7P60409 375 aaPredicted RBP1.37□□□□□ -2.19
PTPN22-207ENST00000528414 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
PTPN22-207ENST00000528414 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
PTPN22-207ENST00000528414 KRTAP10-12P60413 245 aa1.34□□□□□ -2.19
PTPN22-207ENST00000528414 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
PTPN22-207ENST00000528414 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
PTPN22-207ENST00000528414 MT3P25713 68 aa1.31□□□□□ -2.2
PTPN22-207ENST00000528414 MUC12Q9UKN1 5478 aa1.29□□□□□ -2.2
PTPN22-207ENST00000528414 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
PTPN22-207ENST00000528414 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
PTPN22-207ENST00000528414 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
PTPN22-207ENST00000528414 SPRR2DP22532 72 aa1.24□□□□□ -2.21
PTPN22-207ENST00000528414 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
PTPN22-207ENST00000528414 SPRR2EP22531 72 aa1.23□□□□□ -2.21
PTPN22-207ENST00000528414 SPRR2BP35325 72 aa1.23□□□□□ -2.21
PTPN22-207ENST00000528414 SPRR2AP35326 72 aa1.23□□□□□ -2.21
PTPN22-207ENST00000528414 TNP1P09430 55 aa1.21□□□□□ -2.22
PTPN22-207ENST00000528414 MT1XP80297 61 aa1.2□□□□□ -2.22
PTPN22-207ENST00000528414 KRTAP12-3P60328 96 aa1.16□□□□□ -2.22
PTPN22-207ENST00000528414 MT1GP13640 62 aa1.15□□□□□ -2.23
PTPN22-207ENST00000528414 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
PTPN22-207ENST00000528414 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.23
PTPN22-207ENST00000528414 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
PTPN22-207ENST00000528414 MT1MQ8N339 61 aa1.13□□□□□ -2.23
PTPN22-207ENST00000528414 LCE3AQ5TA76 89 aa1.13□□□□□ -2.23
PTPN22-207ENST00000528414 MT1EP04732 61 aa1.12□□□□□ -2.23
PTPN22-207ENST00000528414 M0R2T5 61 aa1.11□□□□□ -2.23
PTPN22-207ENST00000528414 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
PTPN22-207ENST00000528414 KRTAP9-6A8MVA2 160 aa1.1□□□□□ -2.23
PTPN22-207ENST00000528414 PRM1P04553 51 aa1.1□□□□□ -2.23
PTPN22-207ENST00000528414 SPRR2FQ96RM1 72 aa1.09□□□□□ -2.24
PTPN22-207ENST00000528414 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
PTPN22-207ENST00000528414 MT1LQ93083 61 aa1.01□□□□□ -2.25
PTPN22-207ENST00000528414 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
PTPN22-207ENST00000528414 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
PTPN22-207ENST00000528414 MT1AP04731 61 aa0.96□□□□□ -2.26
PTPN22-207ENST00000528414 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
PTPN22-207ENST00000528414 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
PTPN22-207ENST00000528414 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
PTPN22-207ENST00000528414 MT4P47944 62 aa0.83□□□□□ -2.28
PTPN22-207ENST00000528414 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
PTPN22-207ENST00000528414 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
PTPN22-207ENST00000528414 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 85.9 ms