RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
CHD7-208ENST00000528280 ROMO1P60602 79 aa3.84□□□□□ -1.79
CHD7-208ENST00000528280 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
CHD7-208ENST00000528280 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
CHD7-208ENST00000528280 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
CHD7-208ENST00000528280 A0A0D9SG42 100 aa3.79□□□□□ -1.8
CHD7-208ENST00000528280 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
CHD7-208ENST00000528280 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
CHD7-208ENST00000528280 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
CHD7-208ENST00000528280 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
CHD7-208ENST00000528280 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
CHD7-208ENST00000528280 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
CHD7-208ENST00000528280 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
CHD7-208ENST00000528280 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
CHD7-208ENST00000528280 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
CHD7-208ENST00000528280 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
CHD7-208ENST00000528280 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
CHD7-208ENST00000528280 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
CHD7-208ENST00000528280 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
CHD7-208ENST00000528280 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
CHD7-208ENST00000528280 MT1EP04732 61 aa3.56□□□□□ -1.84
CHD7-208ENST00000528280 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
CHD7-208ENST00000528280 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
CHD7-208ENST00000528280 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
CHD7-208ENST00000528280 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
CHD7-208ENST00000528280 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
CHD7-208ENST00000528280 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
CHD7-208ENST00000528280 TNP1P09430 55 aa3.53□□□□□ -1.84
CHD7-208ENST00000528280 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
CHD7-208ENST00000528280 MT1GP13640 62 aa3.51□□□□□ -1.85
CHD7-208ENST00000528280 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
CHD7-208ENST00000528280 MT4P47944 62 aa3.46□□□□□ -1.86
CHD7-208ENST00000528280 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
CHD7-208ENST00000528280 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
CHD7-208ENST00000528280 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
CHD7-208ENST00000528280 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
CHD7-208ENST00000528280 MT1LQ93083 61 aa3.4□□□□□ -1.87
CHD7-208ENST00000528280 MT1MQ8N339 61 aa3.39□□□□□ -1.87
CHD7-208ENST00000528280 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
CHD7-208ENST00000528280 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CHD7-208ENST00000528280 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
CHD7-208ENST00000528280 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
CHD7-208ENST00000528280 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
CHD7-208ENST00000528280 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
CHD7-208ENST00000528280 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
CHD7-208ENST00000528280 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
CHD7-208ENST00000528280 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CHD7-208ENST00000528280 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
CHD7-208ENST00000528280 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
CHD7-208ENST00000528280 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
CHD7-208ENST00000528280 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
CHD7-208ENST00000528280 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CHD7-208ENST00000528280 INE1O15225 51 aa3□□□□□ -1.93
CHD7-208ENST00000528280 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CHD7-208ENST00000528280 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
CHD7-208ENST00000528280 MT1AP04731 61 aa2.91□□□□□ -1.94
CHD7-208ENST00000528280 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
CHD7-208ENST00000528280 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CHD7-208ENST00000528280 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
CHD7-208ENST00000528280 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
CHD7-208ENST00000528280 MT3P25713 68 aa2.71□□□□□ -1.98
CHD7-208ENST00000528280 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
CHD7-208ENST00000528280 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
CHD7-208ENST00000528280 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CHD7-208ENST00000528280 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
CHD7-208ENST00000528280 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
CHD7-208ENST00000528280 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
CHD7-208ENST00000528280 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
CHD7-208ENST00000528280 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
CHD7-208ENST00000528280 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
CHD7-208ENST00000528280 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CHD7-208ENST00000528280 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
CHD7-208ENST00000528280 PRM1P04553 51 aa1.97□□□□□ -2.09
CHD7-208ENST00000528280 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CHD7-208ENST00000528280 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
CHD7-208ENST00000528280 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CHD7-208ENST00000528280 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CHD7-208ENST00000528280 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 88.4 ms