RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
USH1C-203ENST00000526181 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
USH1C-203ENST00000526181 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
USH1C-203ENST00000526181 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
USH1C-203ENST00000526181 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
USH1C-203ENST00000526181 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
USH1C-203ENST00000526181 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
USH1C-203ENST00000526181 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
USH1C-203ENST00000526181 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
USH1C-203ENST00000526181 MT1GP13640 62 aa4.82□□□□□ -1.64
USH1C-203ENST00000526181 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
USH1C-203ENST00000526181 TNP1P09430 55 aa4.79□□□□□ -1.64
USH1C-203ENST00000526181 MT1LQ93083 61 aa4.79□□□□□ -1.64
USH1C-203ENST00000526181 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
USH1C-203ENST00000526181 MT1MQ8N339 61 aa4.77□□□□□ -1.65
USH1C-203ENST00000526181 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
USH1C-203ENST00000526181 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.65
USH1C-203ENST00000526181 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
USH1C-203ENST00000526181 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
USH1C-203ENST00000526181 K7ERS5 55 aa4.68□□□□□ -1.66
USH1C-203ENST00000526181 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
USH1C-203ENST00000526181 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
USH1C-203ENST00000526181 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
USH1C-203ENST00000526181 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
USH1C-203ENST00000526181 MT4P47944 62 aa4.59□□□□□ -1.67
USH1C-203ENST00000526181 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
USH1C-203ENST00000526181 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
USH1C-203ENST00000526181 ROMO1P60602 79 aa4.54□□□□□ -1.68
USH1C-203ENST00000526181 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
USH1C-203ENST00000526181 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
USH1C-203ENST00000526181 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
USH1C-203ENST00000526181 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
USH1C-203ENST00000526181 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
USH1C-203ENST00000526181 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
USH1C-203ENST00000526181 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
USH1C-203ENST00000526181 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
USH1C-203ENST00000526181 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
USH1C-203ENST00000526181 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
USH1C-203ENST00000526181 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
USH1C-203ENST00000526181 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
USH1C-203ENST00000526181 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
USH1C-203ENST00000526181 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
USH1C-203ENST00000526181 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
USH1C-203ENST00000526181 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
USH1C-203ENST00000526181 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
USH1C-203ENST00000526181 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
USH1C-203ENST00000526181 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
USH1C-203ENST00000526181 MT1AP04731 61 aa4.06□□□□□ -1.76
USH1C-203ENST00000526181 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
USH1C-203ENST00000526181 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
USH1C-203ENST00000526181 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
USH1C-203ENST00000526181 H3BS24 57 aa3.86□□□□□ -1.79
USH1C-203ENST00000526181 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
USH1C-203ENST00000526181 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
USH1C-203ENST00000526181 MT3P25713 68 aa3.7□□□□□ -1.82
USH1C-203ENST00000526181 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
USH1C-203ENST00000526181 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
USH1C-203ENST00000526181 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
USH1C-203ENST00000526181 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
USH1C-203ENST00000526181 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
USH1C-203ENST00000526181 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
USH1C-203ENST00000526181 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
USH1C-203ENST00000526181 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
USH1C-203ENST00000526181 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
USH1C-203ENST00000526181 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
USH1C-203ENST00000526181 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
USH1C-203ENST00000526181 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
USH1C-203ENST00000526181 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
USH1C-203ENST00000526181 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
USH1C-203ENST00000526181 INE1O15225 51 aa2.85□□□□□ -1.95
USH1C-203ENST00000526181 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
USH1C-203ENST00000526181 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
USH1C-203ENST00000526181 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
USH1C-203ENST00000526181 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
USH1C-203ENST00000526181 PRM1P04553 51 aa2.38□□□□□ -2.03
USH1C-203ENST00000526181 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
USH1C-203ENST00000526181 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
USH1C-203ENST00000526181 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 79.3 ms