RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC4-206ENST00000525303 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
TRAPPC4-206ENST00000525303 KRTAP12-1P59990 96 aa3.81□□□□□ -1.8
TRAPPC4-206ENST00000525303 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
TRAPPC4-206ENST00000525303 A8MU10 97 aa3.8□□□□□ -1.8
TRAPPC4-206ENST00000525303 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
TRAPPC4-206ENST00000525303 A6NED7 52 aa3.77□□□□□ -1.81
TRAPPC4-206ENST00000525303 K7ERS5 55 aa3.76□□□□□ -1.81
TRAPPC4-206ENST00000525303 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
TRAPPC4-206ENST00000525303 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
TRAPPC4-206ENST00000525303 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
TRAPPC4-206ENST00000525303 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
TRAPPC4-206ENST00000525303 TNP1P09430 55 aa3.62□□□□□ -1.83
TRAPPC4-206ENST00000525303 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
TRAPPC4-206ENST00000525303 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
TRAPPC4-206ENST00000525303 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
TRAPPC4-206ENST00000525303 MT1EP04732 61 aa3.57□□□□□ -1.84
TRAPPC4-206ENST00000525303 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
TRAPPC4-206ENST00000525303 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
TRAPPC4-206ENST00000525303 MT4P47944 62 aa3.51□□□□□ -1.85
TRAPPC4-206ENST00000525303 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
TRAPPC4-206ENST00000525303 ROMO1P60602 79 aa3.49□□□□□ -1.85
TRAPPC4-206ENST00000525303 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
TRAPPC4-206ENST00000525303 MT1GP13640 62 aa3.47□□□□□ -1.85
TRAPPC4-206ENST00000525303 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
TRAPPC4-206ENST00000525303 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
TRAPPC4-206ENST00000525303 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
TRAPPC4-206ENST00000525303 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
TRAPPC4-206ENST00000525303 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
TRAPPC4-206ENST00000525303 MT1MQ8N339 61 aa3.42□□□□□ -1.86
TRAPPC4-206ENST00000525303 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
TRAPPC4-206ENST00000525303 MT1LQ93083 61 aa3.38□□□□□ -1.87
TRAPPC4-206ENST00000525303 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
TRAPPC4-206ENST00000525303 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
TRAPPC4-206ENST00000525303 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
TRAPPC4-206ENST00000525303 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
TRAPPC4-206ENST00000525303 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC4-206ENST00000525303 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
TRAPPC4-206ENST00000525303 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
TRAPPC4-206ENST00000525303 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
TRAPPC4-206ENST00000525303 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
TRAPPC4-206ENST00000525303 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC4-206ENST00000525303 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
TRAPPC4-206ENST00000525303 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
TRAPPC4-206ENST00000525303 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
TRAPPC4-206ENST00000525303 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-206ENST00000525303 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
TRAPPC4-206ENST00000525303 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
TRAPPC4-206ENST00000525303 SVIPQ8NHG7 77 aa3.04□□□□□ -1.92
TRAPPC4-206ENST00000525303 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
TRAPPC4-206ENST00000525303 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
TRAPPC4-206ENST00000525303 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
TRAPPC4-206ENST00000525303 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
TRAPPC4-206ENST00000525303 MT1AP04731 61 aa2.86□□□□□ -1.95
TRAPPC4-206ENST00000525303 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
TRAPPC4-206ENST00000525303 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC4-206ENST00000525303 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
TRAPPC4-206ENST00000525303 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
TRAPPC4-206ENST00000525303 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
TRAPPC4-206ENST00000525303 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
TRAPPC4-206ENST00000525303 MT3P25713 68 aa2.78□□□□□ -1.96
TRAPPC4-206ENST00000525303 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
TRAPPC4-206ENST00000525303 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
TRAPPC4-206ENST00000525303 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
TRAPPC4-206ENST00000525303 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
TRAPPC4-206ENST00000525303 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
TRAPPC4-206ENST00000525303 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
TRAPPC4-206ENST00000525303 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
TRAPPC4-206ENST00000525303 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
TRAPPC4-206ENST00000525303 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
TRAPPC4-206ENST00000525303 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
TRAPPC4-206ENST00000525303 INE1O15225 51 aa1.98□□□□□ -2.09
TRAPPC4-206ENST00000525303 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
TRAPPC4-206ENST00000525303 PRM1P04553 51 aa1.77□□□□□ -2.13
TRAPPC4-206ENST00000525303 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TRAPPC4-206ENST00000525303 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
TRAPPC4-206ENST00000525303 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 180 ms