RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
TRAPPC4-204ENST00000524797 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
TRAPPC4-204ENST00000524797 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
TRAPPC4-204ENST00000524797 A0A0D9SG42 100 aa4.58□□□□□ -1.68
TRAPPC4-204ENST00000524797 KMT2DO14686 5537 aa4.57□□□□□ -1.68
TRAPPC4-204ENST00000524797 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
TRAPPC4-204ENST00000524797 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
TRAPPC4-204ENST00000524797 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
TRAPPC4-204ENST00000524797 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
TRAPPC4-204ENST00000524797 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
TRAPPC4-204ENST00000524797 SPRR2EP22531 72 aa4.51□□□□□ -1.69
TRAPPC4-204ENST00000524797 SPRR2BP35325 72 aa4.51□□□□□ -1.69
TRAPPC4-204ENST00000524797 SPRR2AP35326 72 aa4.51□□□□□ -1.69
TRAPPC4-204ENST00000524797 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
TRAPPC4-204ENST00000524797 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC4-204ENST00000524797 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
TRAPPC4-204ENST00000524797 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
TRAPPC4-204ENST00000524797 KRTAP10-12P60413 245 aa4.46□□□□□ -1.69
TRAPPC4-204ENST00000524797 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
TRAPPC4-204ENST00000524797 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
TRAPPC4-204ENST00000524797 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
TRAPPC4-204ENST00000524797 SPRR2DP22532 72 aa4.36□□□□□ -1.71
TRAPPC4-204ENST00000524797 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
TRAPPC4-204ENST00000524797 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
TRAPPC4-204ENST00000524797 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
TRAPPC4-204ENST00000524797 MT1EP04732 61 aa4.17□□□□□ -1.74
TRAPPC4-204ENST00000524797 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
TRAPPC4-204ENST00000524797 INE1O15225 51 aa4.15□□□□□ -1.75
TRAPPC4-204ENST00000524797 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
TRAPPC4-204ENST00000524797 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
TRAPPC4-204ENST00000524797 MT1GP13640 62 aa4.03□□□□□ -1.76
TRAPPC4-204ENST00000524797 TNP1P09430 55 aa3.99□□□□□ -1.77
TRAPPC4-204ENST00000524797 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
TRAPPC4-204ENST00000524797 MT1LQ93083 61 aa3.98□□□□□ -1.77
TRAPPC4-204ENST00000524797 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
TRAPPC4-204ENST00000524797 MT1MQ8N339 61 aa3.97□□□□□ -1.77
TRAPPC4-204ENST00000524797 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
TRAPPC4-204ENST00000524797 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
TRAPPC4-204ENST00000524797 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
TRAPPC4-204ENST00000524797 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
TRAPPC4-204ENST00000524797 MT4P47944 62 aa3.81□□□□□ -1.8
TRAPPC4-204ENST00000524797 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
TRAPPC4-204ENST00000524797 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
TRAPPC4-204ENST00000524797 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
TRAPPC4-204ENST00000524797 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC4-204ENST00000524797 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
TRAPPC4-204ENST00000524797 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
TRAPPC4-204ENST00000524797 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
TRAPPC4-204ENST00000524797 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
TRAPPC4-204ENST00000524797 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC4-204ENST00000524797 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.85
TRAPPC4-204ENST00000524797 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.85
TRAPPC4-204ENST00000524797 MT1AP04731 61 aa3.4□□□□□ -1.87
TRAPPC4-204ENST00000524797 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
TRAPPC4-204ENST00000524797 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
TRAPPC4-204ENST00000524797 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
TRAPPC4-204ENST00000524797 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
TRAPPC4-204ENST00000524797 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
TRAPPC4-204ENST00000524797 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
TRAPPC4-204ENST00000524797 MT3P25713 68 aa3.13□□□□□ -1.91
TRAPPC4-204ENST00000524797 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
TRAPPC4-204ENST00000524797 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
TRAPPC4-204ENST00000524797 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
TRAPPC4-204ENST00000524797 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.93
TRAPPC4-204ENST00000524797 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
TRAPPC4-204ENST00000524797 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
TRAPPC4-204ENST00000524797 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
TRAPPC4-204ENST00000524797 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
TRAPPC4-204ENST00000524797 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
TRAPPC4-204ENST00000524797 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
TRAPPC4-204ENST00000524797 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
TRAPPC4-204ENST00000524797 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TRAPPC4-204ENST00000524797 PRM1P04553 51 aa2.55□□□□□ -2
TRAPPC4-204ENST00000524797 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
TRAPPC4-204ENST00000524797 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
TRAPPC4-204ENST00000524797 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
TRAPPC4-204ENST00000524797 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
TRAPPC4-204ENST00000524797 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms