RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
CNKSR1-209ENST00000524529 PSPHP1O15172 72 aa3.88□□□□□ -1.79
CNKSR1-209ENST00000524529 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
CNKSR1-209ENST00000524529 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
CNKSR1-209ENST00000524529 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
CNKSR1-209ENST00000524529 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
CNKSR1-209ENST00000524529 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
CNKSR1-209ENST00000524529 A8MU10 97 aa3.86□□□□□ -1.79
CNKSR1-209ENST00000524529 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
CNKSR1-209ENST00000524529 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
CNKSR1-209ENST00000524529 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
CNKSR1-209ENST00000524529 A6NED7 52 aa3.78□□□□□ -1.8
CNKSR1-209ENST00000524529 K7ERS5 55 aa3.77□□□□□ -1.81
CNKSR1-209ENST00000524529 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
CNKSR1-209ENST00000524529 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
CNKSR1-209ENST00000524529 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
CNKSR1-209ENST00000524529 TNP1P09430 55 aa3.66□□□□□ -1.82
CNKSR1-209ENST00000524529 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
CNKSR1-209ENST00000524529 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
CNKSR1-209ENST00000524529 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
CNKSR1-209ENST00000524529 MT1EP04732 61 aa3.6□□□□□ -1.83
CNKSR1-209ENST00000524529 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
CNKSR1-209ENST00000524529 KRTAP25-1Q3LHN0 102 aa3.58□□□□□ -1.84
CNKSR1-209ENST00000524529 ROMO1P60602 79 aa3.53□□□□□ -1.84
CNKSR1-209ENST00000524529 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
CNKSR1-209ENST00000524529 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
CNKSR1-209ENST00000524529 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
CNKSR1-209ENST00000524529 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
CNKSR1-209ENST00000524529 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
CNKSR1-209ENST00000524529 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
CNKSR1-209ENST00000524529 MT1GP13640 62 aa3.47□□□□□ -1.85
CNKSR1-209ENST00000524529 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
CNKSR1-209ENST00000524529 MT1MQ8N339 61 aa3.44□□□□□ -1.86
CNKSR1-209ENST00000524529 MT1LQ93083 61 aa3.43□□□□□ -1.86
CNKSR1-209ENST00000524529 MT4P47944 62 aa3.42□□□□□ -1.86
CNKSR1-209ENST00000524529 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
CNKSR1-209ENST00000524529 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
CNKSR1-209ENST00000524529 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
CNKSR1-209ENST00000524529 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
CNKSR1-209ENST00000524529 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
CNKSR1-209ENST00000524529 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
CNKSR1-209ENST00000524529 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
CNKSR1-209ENST00000524529 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
CNKSR1-209ENST00000524529 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CNKSR1-209ENST00000524529 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
CNKSR1-209ENST00000524529 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
CNKSR1-209ENST00000524529 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
CNKSR1-209ENST00000524529 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
CNKSR1-209ENST00000524529 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
CNKSR1-209ENST00000524529 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CNKSR1-209ENST00000524529 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
CNKSR1-209ENST00000524529 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CNKSR1-209ENST00000524529 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CNKSR1-209ENST00000524529 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
CNKSR1-209ENST00000524529 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
CNKSR1-209ENST00000524529 MT1AP04731 61 aa2.9□□□□□ -1.95
CNKSR1-209ENST00000524529 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
CNKSR1-209ENST00000524529 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CNKSR1-209ENST00000524529 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CNKSR1-209ENST00000524529 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
CNKSR1-209ENST00000524529 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
CNKSR1-209ENST00000524529 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CNKSR1-209ENST00000524529 MT3P25713 68 aa2.66□□□□□ -1.98
CNKSR1-209ENST00000524529 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
CNKSR1-209ENST00000524529 LCE1EQ5T753 118 aa2.56□□□□□ -2
CNKSR1-209ENST00000524529 INE1O15225 51 aa2.42□□□□□ -2.02
CNKSR1-209ENST00000524529 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
CNKSR1-209ENST00000524529 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
CNKSR1-209ENST00000524529 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
CNKSR1-209ENST00000524529 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
CNKSR1-209ENST00000524529 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CNKSR1-209ENST00000524529 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CNKSR1-209ENST00000524529 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
CNKSR1-209ENST00000524529 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
CNKSR1-209ENST00000524529 PRM1P04553 51 aa1.78□□□□□ -2.12
CNKSR1-209ENST00000524529 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CNKSR1-209ENST00000524529 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CNKSR1-209ENST00000524529 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 50.5 ms