RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 CYP4F30PQ9H0H9 118 aa2.82□□□□□ -1.96
PUM1-213ENST00000524516 M0QZ58 72 aa2.81□□□□□ -1.96
PUM1-213ENST00000524516 SEC61GP60059 68 aa2.81□□□□□ -1.96
PUM1-213ENST00000524516 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
PUM1-213ENST00000524516 MP68P56378 58 aa2.8□□□□□ -1.96
PUM1-213ENST00000524516 H3BPC8 53 aa2.79□□□□□ -1.96
PUM1-213ENST00000524516 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
PUM1-213ENST00000524516 CASC2Q6XLA1 102 aa2.79□□□□□ -1.96
PUM1-213ENST00000524516 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
PUM1-213ENST00000524516 TRAV22A0A0B4J277 110 aa2.77□□□□□ -1.97
PUM1-213ENST00000524516 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
PUM1-213ENST00000524516 PSPHP1O15172 72 aa2.76□□□□□ -1.97
PUM1-213ENST00000524516 H0Y9P7 68 aa2.75□□□□□ -1.97
PUM1-213ENST00000524516 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
PUM1-213ENST00000524516 LINC00208Q96KT6 92 aa2.75□□□□□ -1.97
PUM1-213ENST00000524516 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
PUM1-213ENST00000524516 MT1LQ93083 61 aa2.74□□□□□ -1.97
PUM1-213ENST00000524516 CHKB-CPT1BH3BT56 60 aa2.73□□□□□ -1.97
PUM1-213ENST00000524516 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
PUM1-213ENST00000524516 LOC101927531A0A1B0GV80 90 aa2.7□□□□□ -1.98
PUM1-213ENST00000524516 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
PUM1-213ENST00000524516 COA5Q86WW8 74 aa2.7□□□□□ -1.98
PUM1-213ENST00000524516 TP53AIP1Q9HCN2 124 aa2.7□□□□□ -1.98
PUM1-213ENST00000524516 A6NED7 52 aa2.69□□□□□ -1.98
PUM1-213ENST00000524516 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
PUM1-213ENST00000524516 LINC01558Q9Y6Z2 57 aa2.69□□□□□ -1.98
PUM1-213ENST00000524516 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
PUM1-213ENST00000524516 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
PUM1-213ENST00000524516 P0C880 135 aa2.67□□□□□ -1.98
PUM1-213ENST00000524516 A8MU10 97 aa2.64□□□□□ -1.99
PUM1-213ENST00000524516 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
PUM1-213ENST00000524516 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
PUM1-213ENST00000524516 ACYP2P14621 99 aa2.61□□□□□ -1.99
PUM1-213ENST00000524516 A0A0D9SG42 100 aa2.59□□□□□ -1.99
PUM1-213ENST00000524516 A0A0A0MQY5 61 aa2.56□□□□□ -2
PUM1-213ENST00000524516 A0A1B0GU69 56 aa2.56□□□□□ -2
PUM1-213ENST00000524516 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
PUM1-213ENST00000524516 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
PUM1-213ENST00000524516 DMAC1Q96GE9 116 aa2.55□□□□□ -2
PUM1-213ENST00000524516 UQCR11O14957 56 aa2.53□□□□□ -2
PUM1-213ENST00000524516 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
PUM1-213ENST00000524516 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
PUM1-213ENST00000524516 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
PUM1-213ENST00000524516 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
PUM1-213ENST00000524516 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
PUM1-213ENST00000524516 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
PUM1-213ENST00000524516 K7ERS5 55 aa2.4□□□□□ -2.03
PUM1-213ENST00000524516 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
PUM1-213ENST00000524516 A0A1B0GU33 70 aa2.38□□□□□ -2.03
PUM1-213ENST00000524516 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
PUM1-213ENST00000524516 ROMO1P60602 79 aa2.34□□□□□ -2.03
PUM1-213ENST00000524516 MT1AP04731 61 aa2.32□□□□□ -2.04
PUM1-213ENST00000524516 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
PUM1-213ENST00000524516 SPINT4Q6UDR6 99 aa2.26□□□□□ -2.05
PUM1-213ENST00000524516 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
PUM1-213ENST00000524516 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
PUM1-213ENST00000524516 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
PUM1-213ENST00000524516 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
PUM1-213ENST00000524516 MT3P25713 68 aa2.16□□□□□ -2.06
PUM1-213ENST00000524516 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
PUM1-213ENST00000524516 TNP1P09430 55 aa2.13□□□□□ -2.07
PUM1-213ENST00000524516 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
PUM1-213ENST00000524516 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
PUM1-213ENST00000524516 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
PUM1-213ENST00000524516 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
PUM1-213ENST00000524516 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
PUM1-213ENST00000524516 LCE3CQ5T5A8 94 aa1.97□□□□□ -2.09
PUM1-213ENST00000524516 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
PUM1-213ENST00000524516 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
PUM1-213ENST00000524516 INE1O15225 51 aa1.82□□□□□ -2.12
PUM1-213ENST00000524516 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
PUM1-213ENST00000524516 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PUM1-213ENST00000524516 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
PUM1-213ENST00000524516 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
PUM1-213ENST00000524516 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
PUM1-213ENST00000524516 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
PUM1-213ENST00000524516 PRM1P04553 51 aa1.22□□□□□ -2.21
PUM1-213ENST00000524516 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 79.5 ms