RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SPRR2BP35325 72 aa4.44□□□□□ -1.7
PVT1-216ENST00000523068 SPRR2AP35326 72 aa4.44□□□□□ -1.7
PVT1-216ENST00000523068 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
PVT1-216ENST00000523068 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
PVT1-216ENST00000523068 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
PVT1-216ENST00000523068 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
PVT1-216ENST00000523068 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
PVT1-216ENST00000523068 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
PVT1-216ENST00000523068 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
PVT1-216ENST00000523068 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
PVT1-216ENST00000523068 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
PVT1-216ENST00000523068 SPRR2DP22532 72 aa4.3□□□□□ -1.72
PVT1-216ENST00000523068 ROMO1P60602 79 aa4.29□□□□□ -1.72
PVT1-216ENST00000523068 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
PVT1-216ENST00000523068 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
PVT1-216ENST00000523068 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
PVT1-216ENST00000523068 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
PVT1-216ENST00000523068 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
PVT1-216ENST00000523068 TNP1P09430 55 aa4.15□□□□□ -1.75
PVT1-216ENST00000523068 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
PVT1-216ENST00000523068 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
PVT1-216ENST00000523068 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
PVT1-216ENST00000523068 MT1EP04732 61 aa4.05□□□□□ -1.76
PVT1-216ENST00000523068 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
PVT1-216ENST00000523068 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
PVT1-216ENST00000523068 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
PVT1-216ENST00000523068 MT1GP13640 62 aa3.95□□□□□ -1.78
PVT1-216ENST00000523068 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
PVT1-216ENST00000523068 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
PVT1-216ENST00000523068 MT1MQ8N339 61 aa3.87□□□□□ -1.79
PVT1-216ENST00000523068 MT1LQ93083 61 aa3.87□□□□□ -1.79
PVT1-216ENST00000523068 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
PVT1-216ENST00000523068 MT4P47944 62 aa3.75□□□□□ -1.81
PVT1-216ENST00000523068 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
PVT1-216ENST00000523068 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
PVT1-216ENST00000523068 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
PVT1-216ENST00000523068 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
PVT1-216ENST00000523068 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
PVT1-216ENST00000523068 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
PVT1-216ENST00000523068 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
PVT1-216ENST00000523068 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
PVT1-216ENST00000523068 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
PVT1-216ENST00000523068 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
PVT1-216ENST00000523068 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
PVT1-216ENST00000523068 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
PVT1-216ENST00000523068 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
PVT1-216ENST00000523068 MT3P25713 68 aa3.44□□□□□ -1.86
PVT1-216ENST00000523068 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
PVT1-216ENST00000523068 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
PVT1-216ENST00000523068 MT1AP04731 61 aa3.3□□□□□ -1.88
PVT1-216ENST00000523068 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
PVT1-216ENST00000523068 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
PVT1-216ENST00000523068 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
PVT1-216ENST00000523068 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
PVT1-216ENST00000523068 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
PVT1-216ENST00000523068 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
PVT1-216ENST00000523068 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
PVT1-216ENST00000523068 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
PVT1-216ENST00000523068 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
PVT1-216ENST00000523068 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
PVT1-216ENST00000523068 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
PVT1-216ENST00000523068 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
PVT1-216ENST00000523068 MUC5ACP98088 5654 aa2.9□□□□□ -1.94
PVT1-216ENST00000523068 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
PVT1-216ENST00000523068 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
PVT1-216ENST00000523068 INE1O15225 51 aa2.74□□□□□ -1.97
PVT1-216ENST00000523068 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
PVT1-216ENST00000523068 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
PVT1-216ENST00000523068 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
PVT1-216ENST00000523068 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
PVT1-216ENST00000523068 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
PVT1-216ENST00000523068 PRM1P04553 51 aa2.22□□□□□ -2.05
PVT1-216ENST00000523068 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
PVT1-216ENST00000523068 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
PVT1-216ENST00000523068 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
PVT1-216ENST00000523068 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
PVT1-216ENST00000523068 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms