RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 UBR4Q5T4S7 5183 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 FAT3Q8TDW7 4589 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 SPTAN1Q13813 2472 aaKnown RBP0.14□□□□□ -2.39
CLK4-213ENST00000523013 DOPEY1Q5JWR5 2465 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 CCDC168Q8NDH2 2452 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 BIRC6Q9NR09 4857 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 PCLOQ9Y6V0 5065 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 DNAJC13O75165 2243 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 PDE4DIPQ5VU43 2346 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 ACANP16112 2415 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 LRP1BQ9NZR2 4599 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 FASNP49327 2511 aaKnown RBP0.14□□□□□ -2.39
CLK4-213ENST00000523013 TLN1Q9Y490 2541 aaKnown RBP0.14□□□□□ -2.39
CLK4-213ENST00000523013 TLN2Q9Y4G6 2542 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 LPAP08519 4548 aa0.14□□□□□ -2.39
CLK4-213ENST00000523013 WNK2Q9Y3S1 2297 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 CEP290O15078 2479 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 PKD1L2Q7Z442 2459 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 STAB1Q9NY15 2570 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 ABCA13Q86UQ4 5058 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 HYDINQ4G0P3 5121 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 MYO9AB2RTY4 2548 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 LRRK2Q5S007 2527 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 RYR3Q15413 4870 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 PRM1P04553 51 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 FAM186AA6NE01 2351 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 STAB2Q8WWQ8 2551 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 MUC17Q685J3 4493 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
CLK4-213ENST00000523013 HIVEP3Q5T1R4 2406 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 APC2O95996 2303 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.13□□□□□ -2.39
CLK4-213ENST00000523013 MUC2Q02817 5179 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 HMCN2Q8NDA2 5059 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 DNHD1Q96M86 4753 aa0.13□□□□□ -2.39
CLK4-213ENST00000523013 ACACBO00763 2458 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 PTPN13Q12923 2485 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 RIF1Q5UIP0 2472 aaKnown RBP0.12□□□□□ -2.39
CLK4-213ENST00000523013 MTORP42345 2549 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 SONP18583 2426 aaKnown RBP0.12□□□□□ -2.39
CLK4-213ENST00000523013 CSPG4Q6UVK1 2322 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 KNL1Q8NG31 2342 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 KRTAP19-5Q3LI72 72 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 KRTAP8-1Q8IUC2 63 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 KIAA1109Q2LD37 5005 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 FAT4Q6V0I7 4981 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 LRP2P98164 4655 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 PCNX1Q96RV3 2341 aa0.12□□□□□ -2.39
CLK4-213ENST00000523013 NBASA2RRP1 2371 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 USH2AO75445 5202 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 MT2AP02795 61 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 MT1FP04733 61 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 MT1HL1P0DM35 61 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 MT1GP13640 62 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 MT1XP80297 61 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 KRTAP6-2Q3LI66 62 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
CLK4-213ENST00000523013 ACACAQ13085 2346 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MT1EP04732 61 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MT1BP07438 61 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 SPRR2DP22532 72 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 SPRR2BP35325 72 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 SPRR2AP35326 72 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MT1HP80294 61 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 KRTAP19-8Q3LI54 63 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MT1MQ8N339 61 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MT1LQ93083 61 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 SPRR2FQ96RM1 72 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
CLK4-213ENST00000523013 MT1AP04731 61 aa0.09□□□□□ -2.4
CLK4-213ENST00000523013 SPRR2EP22531 72 aa0.09□□□□□ -2.4
CLK4-213ENST00000523013 KRTAP19-2Q3LHN2 52 aa0.09□□□□□ -2.4
CLK4-213ENST00000523013 KRTAP6-1Q3LI64 71 aa0.09□□□□□ -2.4
CLK4-213ENST00000523013 KRTAP19-7Q3SYF9 63 aa0.09□□□□□ -2.4
CLK4-213ENST00000523013 MT4P47944 62 aa0.07□□□□□ -2.4
CLK4-213ENST00000523013 KRTAP19-6Q3LI70 58 aa0.06□□□□□ -2.4
CLK4-213ENST00000523013 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
CLK4-213ENST00000523013 KRTAP20-1Q3LI63 56 aa0.04□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 25.3 ms