RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
PVT1-215ENST00000522963 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
PVT1-215ENST00000522963 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
PVT1-215ENST00000522963 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
PVT1-215ENST00000522963 MT1EP04732 61 aa4.39□□□□□ -1.71
PVT1-215ENST00000522963 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
PVT1-215ENST00000522963 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
PVT1-215ENST00000522963 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
PVT1-215ENST00000522963 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
PVT1-215ENST00000522963 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
PVT1-215ENST00000522963 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
PVT1-215ENST00000522963 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
PVT1-215ENST00000522963 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
PVT1-215ENST00000522963 MT1LQ93083 61 aa4.26□□□□□ -1.73
PVT1-215ENST00000522963 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
PVT1-215ENST00000522963 MT1GP13640 62 aa4.2□□□□□ -1.74
PVT1-215ENST00000522963 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
PVT1-215ENST00000522963 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
PVT1-215ENST00000522963 MT1MQ8N339 61 aa4.15□□□□□ -1.75
PVT1-215ENST00000522963 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
PVT1-215ENST00000522963 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
PVT1-215ENST00000522963 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
PVT1-215ENST00000522963 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
PVT1-215ENST00000522963 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
PVT1-215ENST00000522963 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
PVT1-215ENST00000522963 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
PVT1-215ENST00000522963 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
PVT1-215ENST00000522963 MT4P47944 62 aa3.9□□□□□ -1.79
PVT1-215ENST00000522963 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
PVT1-215ENST00000522963 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
PVT1-215ENST00000522963 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
PVT1-215ENST00000522963 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PVT1-215ENST00000522963 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
PVT1-215ENST00000522963 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
PVT1-215ENST00000522963 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
PVT1-215ENST00000522963 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
PVT1-215ENST00000522963 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
PVT1-215ENST00000522963 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
PVT1-215ENST00000522963 H3BS24 57 aa3.71□□□□□ -1.82
PVT1-215ENST00000522963 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
PVT1-215ENST00000522963 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
PVT1-215ENST00000522963 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
PVT1-215ENST00000522963 MT1AP04731 61 aa3.62□□□□□ -1.83
PVT1-215ENST00000522963 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
PVT1-215ENST00000522963 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
PVT1-215ENST00000522963 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
PVT1-215ENST00000522963 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
PVT1-215ENST00000522963 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
PVT1-215ENST00000522963 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
PVT1-215ENST00000522963 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
PVT1-215ENST00000522963 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
PVT1-215ENST00000522963 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
PVT1-215ENST00000522963 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
PVT1-215ENST00000522963 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PVT1-215ENST00000522963 MT3P25713 68 aa3.29□□□□□ -1.88
PVT1-215ENST00000522963 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
PVT1-215ENST00000522963 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
PVT1-215ENST00000522963 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
PVT1-215ENST00000522963 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
PVT1-215ENST00000522963 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
PVT1-215ENST00000522963 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
PVT1-215ENST00000522963 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
PVT1-215ENST00000522963 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
PVT1-215ENST00000522963 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
PVT1-215ENST00000522963 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
PVT1-215ENST00000522963 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
PVT1-215ENST00000522963 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
PVT1-215ENST00000522963 INE1O15225 51 aa2.59□□□□□ -1.99
PVT1-215ENST00000522963 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
PVT1-215ENST00000522963 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
PVT1-215ENST00000522963 PRM1P04553 51 aa2.38□□□□□ -2.03
PVT1-215ENST00000522963 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
PVT1-215ENST00000522963 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
PVT1-215ENST00000522963 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
PVT1-215ENST00000522963 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
PVT1-215ENST00000522963 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
PVT1-215ENST00000522963 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PVT1-215ENST00000522963 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 80 ms