RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
VPS13B-211ENST00000522802 A0A1W2PPM0 123 aa2.37□□□□□ -2.03
VPS13B-211ENST00000522802 NREPQ16612 68 aa2.37□□□□□ -2.03
VPS13B-211ENST00000522802 MT1EP04732 61 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 BAALC-AS2P0C853 105 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 Q1T7F1 81 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 CYSTM1Q9H1C7 97 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 C14orf132Q9NPU4 83 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 SPCS1Q9Y6A9 102 aa2.36□□□□□ -2.03
VPS13B-211ENST00000522802 NDUFC1O43677 76 aa2.35□□□□□ -2.03
VPS13B-211ENST00000522802 COX6CP09669 75 aa2.35□□□□□ -2.03
VPS13B-211ENST00000522802 SERP2Q8N6R1 65 aa2.34□□□□□ -2.03
VPS13B-211ENST00000522802 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
VPS13B-211ENST00000522802 ETDBQ3ZM63 59 aa2.33□□□□□ -2.04
VPS13B-211ENST00000522802 SPATA45Q537H7 98 aa2.33□□□□□ -2.04
VPS13B-211ENST00000522802 R4GN34 69 aa2.33□□□□□ -2.04
VPS13B-211ENST00000522802 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
VPS13B-211ENST00000522802 A6NED7 52 aa2.32□□□□□ -2.04
VPS13B-211ENST00000522802 JMJD7-PLA2G4BH0Y9G9 81 aa2.32□□□□□ -2.04
VPS13B-211ENST00000522802 M0QZ58 72 aa2.32□□□□□ -2.04
VPS13B-211ENST00000522802 P0C880 135 aa2.32□□□□□ -2.04
VPS13B-211ENST00000522802 ROMO1P60602 79 aa2.32□□□□□ -2.04
VPS13B-211ENST00000522802 H3BPC8 53 aa2.31□□□□□ -2.04
VPS13B-211ENST00000522802 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VPS13B-211ENST00000522802 ACYP1P07311 99 aa2.3□□□□□ -2.04
VPS13B-211ENST00000522802 CYP4F30PQ9H0H9 118 aa2.3□□□□□ -2.04
VPS13B-211ENST00000522802 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
VPS13B-211ENST00000522802 MT1MQ8N339 61 aa2.27□□□□□ -2.05
VPS13B-211ENST00000522802 H7BZZ5 65 aa2.26□□□□□ -2.05
VPS13B-211ENST00000522802 ATXN8Q156A1 80 aa2.26□□□□□ -2.05
VPS13B-211ENST00000522802 LINC00643Q86TS7 51 aa2.26□□□□□ -2.05
VPS13B-211ENST00000522802 MT1GP13640 62 aa2.25□□□□□ -2.05
VPS13B-211ENST00000522802 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
VPS13B-211ENST00000522802 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
VPS13B-211ENST00000522802 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
VPS13B-211ENST00000522802 A0A1B0GU33 70 aa2.24□□□□□ -2.05
VPS13B-211ENST00000522802 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
VPS13B-211ENST00000522802 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
VPS13B-211ENST00000522802 TP53AIP1Q9HCN2 124 aa2.21□□□□□ -2.06
VPS13B-211ENST00000522802 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
VPS13B-211ENST00000522802 MT1LQ93083 61 aa2.19□□□□□ -2.06
VPS13B-211ENST00000522802 LOC101927531A0A1B0GV80 90 aa2.18□□□□□ -2.06
VPS13B-211ENST00000522802 TRAV22A0A0B4J277 110 aa2.17□□□□□ -2.06
VPS13B-211ENST00000522802 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
VPS13B-211ENST00000522802 DMAC1Q96GE9 116 aa2.14□□□□□ -2.07
VPS13B-211ENST00000522802 ATP5EP2Q5VTU8 51 aa2.13□□□□□ -2.07
VPS13B-211ENST00000522802 SPINT4Q6UDR6 99 aa2.13□□□□□ -2.07
VPS13B-211ENST00000522802 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
VPS13B-211ENST00000522802 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
VPS13B-211ENST00000522802 UBL5Q9BZL1 73 aa2.11□□□□□ -2.07
VPS13B-211ENST00000522802 A0A0D9SG42 100 aa2.1□□□□□ -2.07
VPS13B-211ENST00000522802 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
VPS13B-211ENST00000522802 H0Y9P7 68 aa2.08□□□□□ -2.08
VPS13B-211ENST00000522802 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
VPS13B-211ENST00000522802 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
VPS13B-211ENST00000522802 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
VPS13B-211ENST00000522802 LINC01558Q9Y6Z2 57 aa2.02□□□□□ -2.09
VPS13B-211ENST00000522802 LINC00208Q96KT6 92 aa2.01□□□□□ -2.09
VPS13B-211ENST00000522802 KRTAP12-3P60328 96 aa2□□□□□ -2.09
VPS13B-211ENST00000522802 PRR15LQ9BU68 103 aa2□□□□□ -2.09
VPS13B-211ENST00000522802 UQCR11O14957 56 aa1.99□□□□□ -2.09
VPS13B-211ENST00000522802 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
VPS13B-211ENST00000522802 SNURFQ9Y675 71 aa1.97□□□□□ -2.09
VPS13B-211ENST00000522802 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
VPS13B-211ENST00000522802 INE1O15225 51 aa1.93□□□□□ -2.1
VPS13B-211ENST00000522802 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
VPS13B-211ENST00000522802 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
VPS13B-211ENST00000522802 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
VPS13B-211ENST00000522802 MT1AP04731 61 aa1.84□□□□□ -2.11
VPS13B-211ENST00000522802 ACYP2P14621 99 aa1.84□□□□□ -2.11
VPS13B-211ENST00000522802 COA5Q86WW8 74 aa1.82□□□□□ -2.12
VPS13B-211ENST00000522802 TNP1P09430 55 aa1.81□□□□□ -2.12
VPS13B-211ENST00000522802 A0A1B0GU69 56 aa1.79□□□□□ -2.12
VPS13B-211ENST00000522802 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
VPS13B-211ENST00000522802 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
VPS13B-211ENST00000522802 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
VPS13B-211ENST00000522802 PRM1P04553 51 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms