RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CLK4-210ENST00000522136 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
CLK4-210ENST00000522136 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
CLK4-210ENST00000522136 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CLK4-210ENST00000522136 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
CLK4-210ENST00000522136 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
CLK4-210ENST00000522136 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
CLK4-210ENST00000522136 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
CLK4-210ENST00000522136 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
CLK4-210ENST00000522136 MT1EP04732 61 aa4.91□□□□□ -1.62
CLK4-210ENST00000522136 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CLK4-210ENST00000522136 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
CLK4-210ENST00000522136 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
CLK4-210ENST00000522136 SPRR2EP22531 72 aa4.81□□□□□ -1.64
CLK4-210ENST00000522136 SPRR2BP35325 72 aa4.81□□□□□ -1.64
CLK4-210ENST00000522136 SPRR2AP35326 72 aa4.81□□□□□ -1.64
CLK4-210ENST00000522136 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
CLK4-210ENST00000522136 MT1LQ93083 61 aa4.78□□□□□ -1.64
CLK4-210ENST00000522136 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
CLK4-210ENST00000522136 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
CLK4-210ENST00000522136 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
CLK4-210ENST00000522136 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
CLK4-210ENST00000522136 MT1GP13640 62 aa4.69□□□□□ -1.66
CLK4-210ENST00000522136 NEBP20929 6669 aa4.67□□□□□ -1.66
CLK4-210ENST00000522136 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
CLK4-210ENST00000522136 MT1MQ8N339 61 aa4.64□□□□□ -1.67
CLK4-210ENST00000522136 SPRR2DP22532 72 aa4.63□□□□□ -1.67
CLK4-210ENST00000522136 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CLK4-210ENST00000522136 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
CLK4-210ENST00000522136 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
CLK4-210ENST00000522136 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
CLK4-210ENST00000522136 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
CLK4-210ENST00000522136 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
CLK4-210ENST00000522136 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
CLK4-210ENST00000522136 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
CLK4-210ENST00000522136 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
CLK4-210ENST00000522136 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
CLK4-210ENST00000522136 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
CLK4-210ENST00000522136 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
CLK4-210ENST00000522136 MT1AP04731 61 aa4.05□□□□□ -1.76
CLK4-210ENST00000522136 MT4P47944 62 aa4.05□□□□□ -1.76
CLK4-210ENST00000522136 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
CLK4-210ENST00000522136 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
CLK4-210ENST00000522136 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
CLK4-210ENST00000522136 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
CLK4-210ENST00000522136 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
CLK4-210ENST00000522136 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
CLK4-210ENST00000522136 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
CLK4-210ENST00000522136 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
CLK4-210ENST00000522136 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
CLK4-210ENST00000522136 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
CLK4-210ENST00000522136 MT3P25713 68 aa3.68□□□□□ -1.82
CLK4-210ENST00000522136 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
CLK4-210ENST00000522136 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
CLK4-210ENST00000522136 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CLK4-210ENST00000522136 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
CLK4-210ENST00000522136 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
CLK4-210ENST00000522136 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
CLK4-210ENST00000522136 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.88
CLK4-210ENST00000522136 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
CLK4-210ENST00000522136 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
CLK4-210ENST00000522136 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CLK4-210ENST00000522136 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CLK4-210ENST00000522136 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CLK4-210ENST00000522136 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
CLK4-210ENST00000522136 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.92
CLK4-210ENST00000522136 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
CLK4-210ENST00000522136 INE1O15225 51 aa3.05□□□□□ -1.92
CLK4-210ENST00000522136 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CLK4-210ENST00000522136 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
CLK4-210ENST00000522136 PRM1P04553 51 aa2.76□□□□□ -1.97
CLK4-210ENST00000522136 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
CLK4-210ENST00000522136 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
CLK4-210ENST00000522136 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
CLK4-210ENST00000522136 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
CLK4-210ENST00000522136 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
CLK4-210ENST00000522136 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CLK4-210ENST00000522136 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 128.7 ms