RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ROMO1P60602 79 aa4.76□□□□□ -1.65
MRPS28-208ENST00000521605 MT1BP07438 61 aa4.75□□□□□ -1.65
MRPS28-208ENST00000521605 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
MRPS28-208ENST00000521605 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
MRPS28-208ENST00000521605 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
MRPS28-208ENST00000521605 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
MRPS28-208ENST00000521605 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
MRPS28-208ENST00000521605 SPRR2DP22532 72 aa4.62□□□□□ -1.67
MRPS28-208ENST00000521605 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
MRPS28-208ENST00000521605 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
MRPS28-208ENST00000521605 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
MRPS28-208ENST00000521605 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
MRPS28-208ENST00000521605 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
MRPS28-208ENST00000521605 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
MRPS28-208ENST00000521605 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
MRPS28-208ENST00000521605 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
MRPS28-208ENST00000521605 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
MRPS28-208ENST00000521605 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
MRPS28-208ENST00000521605 TNP1P09430 55 aa4.46□□□□□ -1.7
MRPS28-208ENST00000521605 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
MRPS28-208ENST00000521605 MT1XP80297 61 aa4.39□□□□□ -1.71
MRPS28-208ENST00000521605 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
MRPS28-208ENST00000521605 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
MRPS28-208ENST00000521605 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
MRPS28-208ENST00000521605 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
MRPS28-208ENST00000521605 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
MRPS28-208ENST00000521605 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
MRPS28-208ENST00000521605 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
MRPS28-208ENST00000521605 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
MRPS28-208ENST00000521605 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
MRPS28-208ENST00000521605 MT4P47944 62 aa4.11□□□□□ -1.75
MRPS28-208ENST00000521605 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
MRPS28-208ENST00000521605 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
MRPS28-208ENST00000521605 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
MRPS28-208ENST00000521605 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
MRPS28-208ENST00000521605 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
MRPS28-208ENST00000521605 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
MRPS28-208ENST00000521605 MT1EP04732 61 aa3.87□□□□□ -1.79
MRPS28-208ENST00000521605 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
MRPS28-208ENST00000521605 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
MRPS28-208ENST00000521605 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
MRPS28-208ENST00000521605 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
MRPS28-208ENST00000521605 MT1LQ93083 61 aa3.79□□□□□ -1.8
MRPS28-208ENST00000521605 MT1GP13640 62 aa3.77□□□□□ -1.81
MRPS28-208ENST00000521605 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
MRPS28-208ENST00000521605 MT1MQ8N339 61 aa3.73□□□□□ -1.81
MRPS28-208ENST00000521605 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
MRPS28-208ENST00000521605 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
MRPS28-208ENST00000521605 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
MRPS28-208ENST00000521605 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
MRPS28-208ENST00000521605 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
MRPS28-208ENST00000521605 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
MRPS28-208ENST00000521605 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
MRPS28-208ENST00000521605 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
MRPS28-208ENST00000521605 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
MRPS28-208ENST00000521605 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
MRPS28-208ENST00000521605 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
MRPS28-208ENST00000521605 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
MRPS28-208ENST00000521605 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
MRPS28-208ENST00000521605 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
MRPS28-208ENST00000521605 MT1AP04731 61 aa3.25□□□□□ -1.89
MRPS28-208ENST00000521605 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
MRPS28-208ENST00000521605 INE1O15225 51 aa3.23□□□□□ -1.89
MRPS28-208ENST00000521605 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
MRPS28-208ENST00000521605 MT3P25713 68 aa3.12□□□□□ -1.91
MRPS28-208ENST00000521605 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
MRPS28-208ENST00000521605 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
MRPS28-208ENST00000521605 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
MRPS28-208ENST00000521605 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
MRPS28-208ENST00000521605 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
MRPS28-208ENST00000521605 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
MRPS28-208ENST00000521605 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
MRPS28-208ENST00000521605 PRM1P04553 51 aa2.43□□□□□ -2.02
MRPS28-208ENST00000521605 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
MRPS28-208ENST00000521605 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
MRPS28-208ENST00000521605 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
MRPS28-208ENST00000521605 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 226.3 ms