RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 P0C880 135 aa3.38□□□□□ -1.87
SPARC-204ENST00000521569 M0QZ58 72 aa3.35□□□□□ -1.87
SPARC-204ENST00000521569 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
SPARC-204ENST00000521569 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
SPARC-204ENST00000521569 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
SPARC-204ENST00000521569 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
SPARC-204ENST00000521569 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
SPARC-204ENST00000521569 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SPARC-204ENST00000521569 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
SPARC-204ENST00000521569 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
SPARC-204ENST00000521569 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
SPARC-204ENST00000521569 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
SPARC-204ENST00000521569 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
SPARC-204ENST00000521569 MT1EP04732 61 aa3.2□□□□□ -1.9
SPARC-204ENST00000521569 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
SPARC-204ENST00000521569 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
SPARC-204ENST00000521569 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
SPARC-204ENST00000521569 A0A0D9SG42 100 aa3.16□□□□□ -1.9
SPARC-204ENST00000521569 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
SPARC-204ENST00000521569 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
SPARC-204ENST00000521569 MT1GP13640 62 aa3.14□□□□□ -1.91
SPARC-204ENST00000521569 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
SPARC-204ENST00000521569 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
SPARC-204ENST00000521569 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
SPARC-204ENST00000521569 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SPARC-204ENST00000521569 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
SPARC-204ENST00000521569 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
SPARC-204ENST00000521569 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
SPARC-204ENST00000521569 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
SPARC-204ENST00000521569 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
SPARC-204ENST00000521569 MT4P47944 62 aa3.06□□□□□ -1.92
SPARC-204ENST00000521569 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
SPARC-204ENST00000521569 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
SPARC-204ENST00000521569 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
SPARC-204ENST00000521569 MT1MQ8N339 61 aa3.04□□□□□ -1.92
SPARC-204ENST00000521569 MT1LQ93083 61 aa3.02□□□□□ -1.93
SPARC-204ENST00000521569 KRTAP23-1A1A580 65 aa3□□□□□ -1.93
SPARC-204ENST00000521569 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
SPARC-204ENST00000521569 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
SPARC-204ENST00000521569 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
SPARC-204ENST00000521569 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
SPARC-204ENST00000521569 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
SPARC-204ENST00000521569 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
SPARC-204ENST00000521569 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
SPARC-204ENST00000521569 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
SPARC-204ENST00000521569 TNP1P09430 55 aa2.83□□□□□ -1.96
SPARC-204ENST00000521569 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
SPARC-204ENST00000521569 INE1O15225 51 aa2.81□□□□□ -1.96
SPARC-204ENST00000521569 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SPARC-204ENST00000521569 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
SPARC-204ENST00000521569 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SPARC-204ENST00000521569 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
SPARC-204ENST00000521569 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
SPARC-204ENST00000521569 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SPARC-204ENST00000521569 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
SPARC-204ENST00000521569 MT1AP04731 61 aa2.56□□□□□ -2
SPARC-204ENST00000521569 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
SPARC-204ENST00000521569 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
SPARC-204ENST00000521569 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
SPARC-204ENST00000521569 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
SPARC-204ENST00000521569 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
SPARC-204ENST00000521569 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
SPARC-204ENST00000521569 MT3P25713 68 aa2.37□□□□□ -2.03
SPARC-204ENST00000521569 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
SPARC-204ENST00000521569 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
SPARC-204ENST00000521569 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
SPARC-204ENST00000521569 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
SPARC-204ENST00000521569 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
SPARC-204ENST00000521569 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
SPARC-204ENST00000521569 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
SPARC-204ENST00000521569 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
SPARC-204ENST00000521569 PRM1P04553 51 aa1.78□□□□□ -2.12
SPARC-204ENST00000521569 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SPARC-204ENST00000521569 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SPARC-204ENST00000521569 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
SPARC-204ENST00000521569 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SPARC-204ENST00000521569 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
SPARC-204ENST00000521569 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 150 ms