RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
TRIM35-204ENST00000521283 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
TRIM35-204ENST00000521283 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
TRIM35-204ENST00000521283 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
TRIM35-204ENST00000521283 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
TRIM35-204ENST00000521283 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
TRIM35-204ENST00000521283 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
TRIM35-204ENST00000521283 MT1XP80297 61 aa4.25□□□□□ -1.73
TRIM35-204ENST00000521283 NEBP20929 6669 aa4.23□□□□□ -1.73
TRIM35-204ENST00000521283 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
TRIM35-204ENST00000521283 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
TRIM35-204ENST00000521283 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
TRIM35-204ENST00000521283 KMT2DO14686 5537 aa4.18□□□□□ -1.74
TRIM35-204ENST00000521283 A0A0D9SG42 100 aa4.18□□□□□ -1.74
TRIM35-204ENST00000521283 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
TRIM35-204ENST00000521283 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
TRIM35-204ENST00000521283 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
TRIM35-204ENST00000521283 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
TRIM35-204ENST00000521283 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
TRIM35-204ENST00000521283 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
TRIM35-204ENST00000521283 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
TRIM35-204ENST00000521283 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
TRIM35-204ENST00000521283 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
TRIM35-204ENST00000521283 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
TRIM35-204ENST00000521283 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
TRIM35-204ENST00000521283 SPRR2EP22531 72 aa4.05□□□□□ -1.76
TRIM35-204ENST00000521283 SPRR2BP35325 72 aa4.05□□□□□ -1.76
TRIM35-204ENST00000521283 SPRR2AP35326 72 aa4.05□□□□□ -1.76
TRIM35-204ENST00000521283 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
TRIM35-204ENST00000521283 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
TRIM35-204ENST00000521283 TNP1P09430 55 aa3.92□□□□□ -1.78
TRIM35-204ENST00000521283 SPRR2DP22532 72 aa3.92□□□□□ -1.78
TRIM35-204ENST00000521283 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
TRIM35-204ENST00000521283 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
TRIM35-204ENST00000521283 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
TRIM35-204ENST00000521283 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
TRIM35-204ENST00000521283 MT1EP04732 61 aa3.78□□□□□ -1.8
TRIM35-204ENST00000521283 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
TRIM35-204ENST00000521283 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
TRIM35-204ENST00000521283 MT1GP13640 62 aa3.73□□□□□ -1.81
TRIM35-204ENST00000521283 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
TRIM35-204ENST00000521283 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
TRIM35-204ENST00000521283 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
TRIM35-204ENST00000521283 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
TRIM35-204ENST00000521283 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
TRIM35-204ENST00000521283 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
TRIM35-204ENST00000521283 MT1LQ93083 61 aa3.61□□□□□ -1.83
TRIM35-204ENST00000521283 MT1MQ8N339 61 aa3.59□□□□□ -1.83
TRIM35-204ENST00000521283 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
TRIM35-204ENST00000521283 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
TRIM35-204ENST00000521283 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
TRIM35-204ENST00000521283 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
TRIM35-204ENST00000521283 MT4P47944 62 aa3.38□□□□□ -1.87
TRIM35-204ENST00000521283 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
TRIM35-204ENST00000521283 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
TRIM35-204ENST00000521283 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
TRIM35-204ENST00000521283 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
TRIM35-204ENST00000521283 INE1O15225 51 aa3.24□□□□□ -1.89
TRIM35-204ENST00000521283 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
TRIM35-204ENST00000521283 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
TRIM35-204ENST00000521283 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
TRIM35-204ENST00000521283 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
TRIM35-204ENST00000521283 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
TRIM35-204ENST00000521283 MT1AP04731 61 aa3.1□□□□□ -1.91
TRIM35-204ENST00000521283 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
TRIM35-204ENST00000521283 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
TRIM35-204ENST00000521283 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
TRIM35-204ENST00000521283 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
TRIM35-204ENST00000521283 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
TRIM35-204ENST00000521283 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
TRIM35-204ENST00000521283 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
TRIM35-204ENST00000521283 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
TRIM35-204ENST00000521283 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TRIM35-204ENST00000521283 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
TRIM35-204ENST00000521283 PRM1P04553 51 aa2.17□□□□□ -2.06
TRIM35-204ENST00000521283 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
TRIM35-204ENST00000521283 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
TRIM35-204ENST00000521283 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 50.6 ms