RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
HDAC2-211ENST00000521233 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
HDAC2-211ENST00000521233 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
HDAC2-211ENST00000521233 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
HDAC2-211ENST00000521233 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
HDAC2-211ENST00000521233 KMT2DO14686 5537 aa4.93□□□□□ -1.62
HDAC2-211ENST00000521233 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
HDAC2-211ENST00000521233 NEBP20929 6669 aa4.87□□□□□ -1.63
HDAC2-211ENST00000521233 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
HDAC2-211ENST00000521233 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
HDAC2-211ENST00000521233 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
HDAC2-211ENST00000521233 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
HDAC2-211ENST00000521233 TNP1P09430 55 aa4.81□□□□□ -1.64
HDAC2-211ENST00000521233 SPRR2EP22531 72 aa4.76□□□□□ -1.65
HDAC2-211ENST00000521233 SPRR2BP35325 72 aa4.76□□□□□ -1.65
HDAC2-211ENST00000521233 SPRR2AP35326 72 aa4.76□□□□□ -1.65
HDAC2-211ENST00000521233 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
HDAC2-211ENST00000521233 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
HDAC2-211ENST00000521233 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
HDAC2-211ENST00000521233 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
HDAC2-211ENST00000521233 MT1EP04732 61 aa4.63□□□□□ -1.67
HDAC2-211ENST00000521233 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
HDAC2-211ENST00000521233 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
HDAC2-211ENST00000521233 SPRR2DP22532 72 aa4.61□□□□□ -1.67
HDAC2-211ENST00000521233 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
HDAC2-211ENST00000521233 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
HDAC2-211ENST00000521233 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
HDAC2-211ENST00000521233 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
HDAC2-211ENST00000521233 MT1GP13640 62 aa4.48□□□□□ -1.69
HDAC2-211ENST00000521233 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
HDAC2-211ENST00000521233 MT1LQ93083 61 aa4.47□□□□□ -1.69
HDAC2-211ENST00000521233 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
HDAC2-211ENST00000521233 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
HDAC2-211ENST00000521233 MT1MQ8N339 61 aa4.39□□□□□ -1.71
HDAC2-211ENST00000521233 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
HDAC2-211ENST00000521233 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
HDAC2-211ENST00000521233 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
HDAC2-211ENST00000521233 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
HDAC2-211ENST00000521233 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
HDAC2-211ENST00000521233 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
HDAC2-211ENST00000521233 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
HDAC2-211ENST00000521233 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
HDAC2-211ENST00000521233 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
HDAC2-211ENST00000521233 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
HDAC2-211ENST00000521233 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
HDAC2-211ENST00000521233 MT4P47944 62 aa3.97□□□□□ -1.77
HDAC2-211ENST00000521233 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
HDAC2-211ENST00000521233 MT3P25713 68 aa3.94□□□□□ -1.78
HDAC2-211ENST00000521233 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
HDAC2-211ENST00000521233 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
HDAC2-211ENST00000521233 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
HDAC2-211ENST00000521233 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
HDAC2-211ENST00000521233 MT1AP04731 61 aa3.83□□□□□ -1.8
HDAC2-211ENST00000521233 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
HDAC2-211ENST00000521233 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
HDAC2-211ENST00000521233 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
HDAC2-211ENST00000521233 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
HDAC2-211ENST00000521233 INE1O15225 51 aa3.66□□□□□ -1.82
HDAC2-211ENST00000521233 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
HDAC2-211ENST00000521233 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
HDAC2-211ENST00000521233 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
HDAC2-211ENST00000521233 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
HDAC2-211ENST00000521233 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
HDAC2-211ENST00000521233 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
HDAC2-211ENST00000521233 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
HDAC2-211ENST00000521233 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
HDAC2-211ENST00000521233 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
HDAC2-211ENST00000521233 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
HDAC2-211ENST00000521233 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
HDAC2-211ENST00000521233 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
HDAC2-211ENST00000521233 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
HDAC2-211ENST00000521233 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
HDAC2-211ENST00000521233 PRM1P04553 51 aa2.68□□□□□ -1.98
HDAC2-211ENST00000521233 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
HDAC2-211ENST00000521233 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
HDAC2-211ENST00000521233 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
HDAC2-211ENST00000521233 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
HDAC2-211ENST00000521233 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 146.6 ms