RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
IGHV4-55-201ENST00000520889 KMT2DO14686 5537 aa2.4□□□□□ -2.02
IGHV4-55-201ENST00000520889 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
IGHV4-55-201ENST00000520889 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
IGHV4-55-201ENST00000520889 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
IGHV4-55-201ENST00000520889 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
IGHV4-55-201ENST00000520889 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
IGHV4-55-201ENST00000520889 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
IGHV4-55-201ENST00000520889 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
IGHV4-55-201ENST00000520889 MT1EP04732 61 aa2.35□□□□□ -2.03
IGHV4-55-201ENST00000520889 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.03
IGHV4-55-201ENST00000520889 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
IGHV4-55-201ENST00000520889 SPRR2EP22531 72 aa2.33□□□□□ -2.04
IGHV4-55-201ENST00000520889 SPRR2BP35325 72 aa2.33□□□□□ -2.04
IGHV4-55-201ENST00000520889 SPRR2AP35326 72 aa2.33□□□□□ -2.04
IGHV4-55-201ENST00000520889 NEBP20929 6669 aa2.31□□□□□ -2.04
IGHV4-55-201ENST00000520889 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
IGHV4-55-201ENST00000520889 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
IGHV4-55-201ENST00000520889 MT1GP13640 62 aa2.3□□□□□ -2.04
IGHV4-55-201ENST00000520889 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
IGHV4-55-201ENST00000520889 MDN1Q9NU22 5596 aa2.27□□□□□ -2.05
IGHV4-55-201ENST00000520889 MT1LQ93083 61 aa2.27□□□□□ -2.05
IGHV4-55-201ENST00000520889 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
IGHV4-55-201ENST00000520889 SPRR2DP22532 72 aa2.26□□□□□ -2.05
IGHV4-55-201ENST00000520889 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
IGHV4-55-201ENST00000520889 KRTAP20-1Q3LI63 56 aa2.24□□□□□ -2.05
IGHV4-55-201ENST00000520889 KRTAP15-1Q3LI76 137 aa2.23□□□□□ -2.05
IGHV4-55-201ENST00000520889 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
IGHV4-55-201ENST00000520889 MT1MQ8N339 61 aa2.23□□□□□ -2.05
IGHV4-55-201ENST00000520889 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
IGHV4-55-201ENST00000520889 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
IGHV4-55-201ENST00000520889 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
IGHV4-55-201ENST00000520889 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.07
IGHV4-55-201ENST00000520889 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
IGHV4-55-201ENST00000520889 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
IGHV4-55-201ENST00000520889 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
IGHV4-55-201ENST00000520889 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
IGHV4-55-201ENST00000520889 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
IGHV4-55-201ENST00000520889 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
IGHV4-55-201ENST00000520889 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
IGHV4-55-201ENST00000520889 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
IGHV4-55-201ENST00000520889 MT1AP04731 61 aa1.96□□□□□ -2.1
IGHV4-55-201ENST00000520889 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
IGHV4-55-201ENST00000520889 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
IGHV4-55-201ENST00000520889 MT4P47944 62 aa1.93□□□□□ -2.1
IGHV4-55-201ENST00000520889 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
IGHV4-55-201ENST00000520889 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
IGHV4-55-201ENST00000520889 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
IGHV4-55-201ENST00000520889 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
IGHV4-55-201ENST00000520889 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
IGHV4-55-201ENST00000520889 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
IGHV4-55-201ENST00000520889 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
IGHV4-55-201ENST00000520889 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
IGHV4-55-201ENST00000520889 MT3P25713 68 aa1.79□□□□□ -2.12
IGHV4-55-201ENST00000520889 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
IGHV4-55-201ENST00000520889 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
IGHV4-55-201ENST00000520889 OBSCNQ5VST9 7968 aa1.72□□□□□ -2.13
IGHV4-55-201ENST00000520889 NDUFAF8A1L188 74 aa1.72□□□□□ -2.13
IGHV4-55-201ENST00000520889 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
IGHV4-55-201ENST00000520889 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
IGHV4-55-201ENST00000520889 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
IGHV4-55-201ENST00000520889 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
IGHV4-55-201ENST00000520889 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
IGHV4-55-201ENST00000520889 LCE3EQ5T5B0 92 aa1.53□□□□□ -2.16
IGHV4-55-201ENST00000520889 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
IGHV4-55-201ENST00000520889 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
IGHV4-55-201ENST00000520889 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
IGHV4-55-201ENST00000520889 INE1O15225 51 aa1.44□□□□□ -2.18
IGHV4-55-201ENST00000520889 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
IGHV4-55-201ENST00000520889 LCE1FQ5T754 118 aa1.37□□□□□ -2.19
IGHV4-55-201ENST00000520889 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
IGHV4-55-201ENST00000520889 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
IGHV4-55-201ENST00000520889 PRM1P04553 51 aa1.21□□□□□ -2.22
IGHV4-55-201ENST00000520889 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
IGHV4-55-201ENST00000520889 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
IGHV4-55-201ENST00000520889 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
IGHV4-55-201ENST00000520889 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 288 ms