RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
CTNNA1-223ENST00000520520 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
CTNNA1-223ENST00000520520 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
CTNNA1-223ENST00000520520 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
CTNNA1-223ENST00000520520 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
CTNNA1-223ENST00000520520 NEBP20929 6669 aa3.62□□□□□ -1.83
CTNNA1-223ENST00000520520 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
CTNNA1-223ENST00000520520 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
CTNNA1-223ENST00000520520 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
CTNNA1-223ENST00000520520 MT1BP07438 61 aa3.53□□□□□ -1.84
CTNNA1-223ENST00000520520 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
CTNNA1-223ENST00000520520 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
CTNNA1-223ENST00000520520 KMT2DO14686 5537 aa3.5□□□□□ -1.85
CTNNA1-223ENST00000520520 MT3P25713 68 aa3.49□□□□□ -1.85
CTNNA1-223ENST00000520520 KRTAP10-5P60370 271 aa3.48□□□□□ -1.85
CTNNA1-223ENST00000520520 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
CTNNA1-223ENST00000520520 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
CTNNA1-223ENST00000520520 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
CTNNA1-223ENST00000520520 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
CTNNA1-223ENST00000520520 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
CTNNA1-223ENST00000520520 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
CTNNA1-223ENST00000520520 SPRR2EP22531 72 aa3.41□□□□□ -1.86
CTNNA1-223ENST00000520520 SPRR2BP35325 72 aa3.41□□□□□ -1.86
CTNNA1-223ENST00000520520 SPRR2AP35326 72 aa3.41□□□□□ -1.86
CTNNA1-223ENST00000520520 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
CTNNA1-223ENST00000520520 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
CTNNA1-223ENST00000520520 INE1O15225 51 aa3.37□□□□□ -1.87
CTNNA1-223ENST00000520520 MT1XP80297 61 aa3.37□□□□□ -1.87
CTNNA1-223ENST00000520520 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CTNNA1-223ENST00000520520 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
CTNNA1-223ENST00000520520 SPRR2DP22532 72 aa3.3□□□□□ -1.88
CTNNA1-223ENST00000520520 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
CTNNA1-223ENST00000520520 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
CTNNA1-223ENST00000520520 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CTNNA1-223ENST00000520520 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
CTNNA1-223ENST00000520520 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CTNNA1-223ENST00000520520 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
CTNNA1-223ENST00000520520 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
CTNNA1-223ENST00000520520 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CTNNA1-223ENST00000520520 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
CTNNA1-223ENST00000520520 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
CTNNA1-223ENST00000520520 MT1EP04732 61 aa2.94□□□□□ -1.94
CTNNA1-223ENST00000520520 MT1LQ93083 61 aa2.94□□□□□ -1.94
CTNNA1-223ENST00000520520 MT4P47944 62 aa2.93□□□□□ -1.94
CTNNA1-223ENST00000520520 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
CTNNA1-223ENST00000520520 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
CTNNA1-223ENST00000520520 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
CTNNA1-223ENST00000520520 MT1GP13640 62 aa2.81□□□□□ -1.96
CTNNA1-223ENST00000520520 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
CTNNA1-223ENST00000520520 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
CTNNA1-223ENST00000520520 MT1MQ8N339 61 aa2.79□□□□□ -1.96
CTNNA1-223ENST00000520520 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
CTNNA1-223ENST00000520520 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
CTNNA1-223ENST00000520520 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
CTNNA1-223ENST00000520520 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
CTNNA1-223ENST00000520520 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
CTNNA1-223ENST00000520520 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
CTNNA1-223ENST00000520520 MT1AP04731 61 aa2.58□□□□□ -2
CTNNA1-223ENST00000520520 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
CTNNA1-223ENST00000520520 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
CTNNA1-223ENST00000520520 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
CTNNA1-223ENST00000520520 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CTNNA1-223ENST00000520520 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
CTNNA1-223ENST00000520520 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
CTNNA1-223ENST00000520520 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CTNNA1-223ENST00000520520 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
CTNNA1-223ENST00000520520 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
CTNNA1-223ENST00000520520 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
CTNNA1-223ENST00000520520 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
CTNNA1-223ENST00000520520 PRM1P04553 51 aa2.32□□□□□ -2.04
CTNNA1-223ENST00000520520 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
CTNNA1-223ENST00000520520 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
CTNNA1-223ENST00000520520 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
CTNNA1-223ENST00000520520 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
CTNNA1-223ENST00000520520 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
CTNNA1-223ENST00000520520 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
CTNNA1-223ENST00000520520 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CTNNA1-223ENST00000520520 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms