RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TNP1P09430 55 aa3.55□□□□□ -1.84
VAPB-206ENST00000520497 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
VAPB-206ENST00000520497 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
VAPB-206ENST00000520497 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
VAPB-206ENST00000520497 NEBP20929 6669 aa3.53□□□□□ -1.84
VAPB-206ENST00000520497 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
VAPB-206ENST00000520497 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
VAPB-206ENST00000520497 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
VAPB-206ENST00000520497 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
VAPB-206ENST00000520497 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
VAPB-206ENST00000520497 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
VAPB-206ENST00000520497 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
VAPB-206ENST00000520497 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
VAPB-206ENST00000520497 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
VAPB-206ENST00000520497 KMT2DO14686 5537 aa3.3□□□□□ -1.88
VAPB-206ENST00000520497 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
VAPB-206ENST00000520497 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
VAPB-206ENST00000520497 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
VAPB-206ENST00000520497 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
VAPB-206ENST00000520497 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
VAPB-206ENST00000520497 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
VAPB-206ENST00000520497 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
VAPB-206ENST00000520497 SPRR2EP22531 72 aa3.19□□□□□ -1.9
VAPB-206ENST00000520497 SPRR2BP35325 72 aa3.19□□□□□ -1.9
VAPB-206ENST00000520497 SPRR2AP35326 72 aa3.19□□□□□ -1.9
VAPB-206ENST00000520497 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
VAPB-206ENST00000520497 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
VAPB-206ENST00000520497 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
VAPB-206ENST00000520497 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
VAPB-206ENST00000520497 MT1EP04732 61 aa3.13□□□□□ -1.91
VAPB-206ENST00000520497 SPRR2DP22532 72 aa3.08□□□□□ -1.92
VAPB-206ENST00000520497 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
VAPB-206ENST00000520497 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
VAPB-206ENST00000520497 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
VAPB-206ENST00000520497 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
VAPB-206ENST00000520497 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
VAPB-206ENST00000520497 MT1LQ93083 61 aa3.05□□□□□ -1.92
VAPB-206ENST00000520497 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
VAPB-206ENST00000520497 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
VAPB-206ENST00000520497 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
VAPB-206ENST00000520497 MT1GP13640 62 aa2.98□□□□□ -1.93
VAPB-206ENST00000520497 MT3P25713 68 aa2.94□□□□□ -1.94
VAPB-206ENST00000520497 MT1MQ8N339 61 aa2.94□□□□□ -1.94
VAPB-206ENST00000520497 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
VAPB-206ENST00000520497 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
VAPB-206ENST00000520497 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
VAPB-206ENST00000520497 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
VAPB-206ENST00000520497 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
VAPB-206ENST00000520497 MT4P47944 62 aa2.74□□□□□ -1.97
VAPB-206ENST00000520497 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
VAPB-206ENST00000520497 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
VAPB-206ENST00000520497 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
VAPB-206ENST00000520497 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
VAPB-206ENST00000520497 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
VAPB-206ENST00000520497 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
VAPB-206ENST00000520497 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
VAPB-206ENST00000520497 MT1AP04731 61 aa2.59□□□□□ -1.99
VAPB-206ENST00000520497 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
VAPB-206ENST00000520497 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
VAPB-206ENST00000520497 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
VAPB-206ENST00000520497 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
VAPB-206ENST00000520497 INE1O15225 51 aa2.48□□□□□ -2.01
VAPB-206ENST00000520497 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
VAPB-206ENST00000520497 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
VAPB-206ENST00000520497 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
VAPB-206ENST00000520497 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
VAPB-206ENST00000520497 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
VAPB-206ENST00000520497 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
VAPB-206ENST00000520497 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
VAPB-206ENST00000520497 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
VAPB-206ENST00000520497 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
VAPB-206ENST00000520497 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
VAPB-206ENST00000520497 PRM1P04553 51 aa1.91□□□□□ -2.1
VAPB-206ENST00000520497 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
VAPB-206ENST00000520497 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
VAPB-206ENST00000520497 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
VAPB-206ENST00000520497 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
VAPB-206ENST00000520497 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 15 ms