RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CTNNA1-219ENST00000520158 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
CTNNA1-219ENST00000520158 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CTNNA1-219ENST00000520158 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
CTNNA1-219ENST00000520158 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
CTNNA1-219ENST00000520158 MT1BP07438 61 aa2.56□□□□□ -2
CTNNA1-219ENST00000520158 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
CTNNA1-219ENST00000520158 NEBP20929 6669 aa2.56□□□□□ -2
CTNNA1-219ENST00000520158 KRTAP12-2P59991 146 aa2.53□□□□□ -2
CTNNA1-219ENST00000520158 KRTAP10-5P60370 271 aa2.53□□□□□ -2
CTNNA1-219ENST00000520158 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
CTNNA1-219ENST00000520158 S4R3F8 94 aa2.51□□□□□ -2.01
CTNNA1-219ENST00000520158 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
CTNNA1-219ENST00000520158 KMT2DO14686 5537 aa2.47□□□□□ -2.01
CTNNA1-219ENST00000520158 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
CTNNA1-219ENST00000520158 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
CTNNA1-219ENST00000520158 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
CTNNA1-219ENST00000520158 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
CTNNA1-219ENST00000520158 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
CTNNA1-219ENST00000520158 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
CTNNA1-219ENST00000520158 MT3P25713 68 aa2.39□□□□□ -2.03
CTNNA1-219ENST00000520158 MT1XP80297 61 aa2.38□□□□□ -2.03
CTNNA1-219ENST00000520158 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
CTNNA1-219ENST00000520158 SPRR2EP22531 72 aa2.34□□□□□ -2.03
CTNNA1-219ENST00000520158 SPRR2BP35325 72 aa2.34□□□□□ -2.03
CTNNA1-219ENST00000520158 SPRR2AP35326 72 aa2.34□□□□□ -2.03
CTNNA1-219ENST00000520158 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
CTNNA1-219ENST00000520158 A0A0D9SG42 100 aa2.33□□□□□ -2.04
CTNNA1-219ENST00000520158 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
CTNNA1-219ENST00000520158 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
CTNNA1-219ENST00000520158 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
CTNNA1-219ENST00000520158 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
CTNNA1-219ENST00000520158 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
CTNNA1-219ENST00000520158 SPRR2DP22532 72 aa2.27□□□□□ -2.05
CTNNA1-219ENST00000520158 M0QZ58 72 aa2.26□□□□□ -2.05
CTNNA1-219ENST00000520158 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
CTNNA1-219ENST00000520158 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
CTNNA1-219ENST00000520158 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CTNNA1-219ENST00000520158 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
CTNNA1-219ENST00000520158 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
CTNNA1-219ENST00000520158 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
CTNNA1-219ENST00000520158 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
CTNNA1-219ENST00000520158 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
CTNNA1-219ENST00000520158 MT1EP04732 61 aa2.11□□□□□ -2.07
CTNNA1-219ENST00000520158 MT1GP13640 62 aa2.08□□□□□ -2.08
CTNNA1-219ENST00000520158 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
CTNNA1-219ENST00000520158 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
CTNNA1-219ENST00000520158 MT1MQ8N339 61 aa2.01□□□□□ -2.09
CTNNA1-219ENST00000520158 MT1LQ93083 61 aa2□□□□□ -2.09
CTNNA1-219ENST00000520158 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
CTNNA1-219ENST00000520158 MT4P47944 62 aa1.97□□□□□ -2.09
CTNNA1-219ENST00000520158 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
CTNNA1-219ENST00000520158 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
CTNNA1-219ENST00000520158 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
CTNNA1-219ENST00000520158 TNP1P09430 55 aa1.93□□□□□ -2.1
CTNNA1-219ENST00000520158 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
CTNNA1-219ENST00000520158 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
CTNNA1-219ENST00000520158 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
CTNNA1-219ENST00000520158 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
CTNNA1-219ENST00000520158 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
CTNNA1-219ENST00000520158 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CTNNA1-219ENST00000520158 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
CTNNA1-219ENST00000520158 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
CTNNA1-219ENST00000520158 MT1AP04731 61 aa1.71□□□□□ -2.14
CTNNA1-219ENST00000520158 KRTAP6-1Q3LI64 71 aa1.69□□□□□ -2.14
CTNNA1-219ENST00000520158 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
CTNNA1-219ENST00000520158 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
CTNNA1-219ENST00000520158 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
CTNNA1-219ENST00000520158 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
CTNNA1-219ENST00000520158 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CTNNA1-219ENST00000520158 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
CTNNA1-219ENST00000520158 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
CTNNA1-219ENST00000520158 PRM1P04553 51 aa1.51□□□□□ -2.17
CTNNA1-219ENST00000520158 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
CTNNA1-219ENST00000520158 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
CTNNA1-219ENST00000520158 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
CTNNA1-219ENST00000520158 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
CTNNA1-219ENST00000520158 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 75.8 ms