RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
SPIDR-208ENST00000518711 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
SPIDR-208ENST00000518711 UQCR11O14957 56 aa2.41□□□□□ -2.02
SPIDR-208ENST00000518711 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
SPIDR-208ENST00000518711 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
SPIDR-208ENST00000518711 PMAIP1Q13794 54 aa2.4□□□□□ -2.03
SPIDR-208ENST00000518711 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
SPIDR-208ENST00000518711 MT3P25713 68 aa2.39□□□□□ -2.03
SPIDR-208ENST00000518711 LCA10Q71F78 164 aa2.39□□□□□ -2.03
SPIDR-208ENST00000518711 S4R3F8 94 aa2.39□□□□□ -2.03
SPIDR-208ENST00000518711 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
SPIDR-208ENST00000518711 SPATA8Q6RVD6 105 aa2.38□□□□□ -2.03
SPIDR-208ENST00000518711 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
SPIDR-208ENST00000518711 H0YAA0 97 aa2.35□□□□□ -2.03
SPIDR-208ENST00000518711 MT1XP80297 61 aa2.35□□□□□ -2.03
SPIDR-208ENST00000518711 A0A1B0GU33 70 aa2.34□□□□□ -2.03
SPIDR-208ENST00000518711 A8MU10 97 aa2.32□□□□□ -2.04
SPIDR-208ENST00000518711 K7ERS5 55 aa2.32□□□□□ -2.04
SPIDR-208ENST00000518711 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
SPIDR-208ENST00000518711 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
SPIDR-208ENST00000518711 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
SPIDR-208ENST00000518711 M0QZ58 72 aa2.24□□□□□ -2.05
SPIDR-208ENST00000518711 ADM2Q7Z4H4 148 aa2.24□□□□□ -2.05
SPIDR-208ENST00000518711 P0C880 135 aa2.2□□□□□ -2.06
SPIDR-208ENST00000518711 KRTAP10-7P60409 375 aaPredicted RBP2.2□□□□□ -2.06
SPIDR-208ENST00000518711 R4GN34 69 aa2.2□□□□□ -2.06
SPIDR-208ENST00000518711 A0A0D9SG42 100 aa2.19□□□□□ -2.06
SPIDR-208ENST00000518711 ROMO1P60602 79 aa2.18□□□□□ -2.06
SPIDR-208ENST00000518711 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
SPIDR-208ENST00000518711 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
SPIDR-208ENST00000518711 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
SPIDR-208ENST00000518711 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
SPIDR-208ENST00000518711 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
SPIDR-208ENST00000518711 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
SPIDR-208ENST00000518711 LINC01554Q52M75 96 aa2.13□□□□□ -2.07
SPIDR-208ENST00000518711 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SPIDR-208ENST00000518711 MT1GP13640 62 aa2.11□□□□□ -2.07
SPIDR-208ENST00000518711 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
SPIDR-208ENST00000518711 CAMK2N1Q7Z7J9 78 aa2.11□□□□□ -2.07
SPIDR-208ENST00000518711 MT1EP04732 61 aa2.1□□□□□ -2.07
SPIDR-208ENST00000518711 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
SPIDR-208ENST00000518711 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
SPIDR-208ENST00000518711 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
SPIDR-208ENST00000518711 MT1MQ8N339 61 aa2.01□□□□□ -2.09
SPIDR-208ENST00000518711 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
SPIDR-208ENST00000518711 TNP1P09430 55 aa1.98□□□□□ -2.09
SPIDR-208ENST00000518711 KRTAP19-5Q3LI72 72 aa1.97□□□□□ -2.09
SPIDR-208ENST00000518711 MT1LQ93083 61 aa1.97□□□□□ -2.09
SPIDR-208ENST00000518711 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.09
SPIDR-208ENST00000518711 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
SPIDR-208ENST00000518711 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
SPIDR-208ENST00000518711 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
SPIDR-208ENST00000518711 LCE1EQ5T753 118 aa1.9□□□□□ -2.11
SPIDR-208ENST00000518711 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
SPIDR-208ENST00000518711 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
SPIDR-208ENST00000518711 LUZP6Q538Z0 58 aa1.89□□□□□ -2.11
SPIDR-208ENST00000518711 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.12
SPIDR-208ENST00000518711 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
SPIDR-208ENST00000518711 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
SPIDR-208ENST00000518711 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
SPIDR-208ENST00000518711 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SPIDR-208ENST00000518711 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
SPIDR-208ENST00000518711 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
SPIDR-208ENST00000518711 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
SPIDR-208ENST00000518711 MT1AP04731 61 aa1.68□□□□□ -2.14
SPIDR-208ENST00000518711 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
SPIDR-208ENST00000518711 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
SPIDR-208ENST00000518711 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
SPIDR-208ENST00000518711 INE1O15225 51 aa1.56□□□□□ -2.16
SPIDR-208ENST00000518711 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
SPIDR-208ENST00000518711 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
SPIDR-208ENST00000518711 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
SPIDR-208ENST00000518711 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
SPIDR-208ENST00000518711 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
SPIDR-208ENST00000518711 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
SPIDR-208ENST00000518711 PRM1P04553 51 aa1.12□□□□□ -2.23
SPIDR-208ENST00000518711 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
SPIDR-208ENST00000518711 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 32.1 ms