RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 NEBP20929 6669 aa4.22□□□□□ -1.73
PABPC1-203ENST00000517921 TNP1P09430 55 aa4.22□□□□□ -1.73
PABPC1-203ENST00000517921 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
PABPC1-203ENST00000517921 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
PABPC1-203ENST00000517921 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
PABPC1-203ENST00000517921 KMT2DO14686 5537 aa4.1□□□□□ -1.75
PABPC1-203ENST00000517921 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
PABPC1-203ENST00000517921 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
PABPC1-203ENST00000517921 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
PABPC1-203ENST00000517921 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
PABPC1-203ENST00000517921 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
PABPC1-203ENST00000517921 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
PABPC1-203ENST00000517921 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
PABPC1-203ENST00000517921 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
PABPC1-203ENST00000517921 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
PABPC1-203ENST00000517921 SPRR2EP22531 72 aa3.95□□□□□ -1.78
PABPC1-203ENST00000517921 SPRR2BP35325 72 aa3.95□□□□□ -1.78
PABPC1-203ENST00000517921 SPRR2AP35326 72 aa3.95□□□□□ -1.78
PABPC1-203ENST00000517921 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
PABPC1-203ENST00000517921 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
PABPC1-203ENST00000517921 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
PABPC1-203ENST00000517921 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
PABPC1-203ENST00000517921 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
PABPC1-203ENST00000517921 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
PABPC1-203ENST00000517921 MT1EP04732 61 aa3.88□□□□□ -1.79
PABPC1-203ENST00000517921 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
PABPC1-203ENST00000517921 SPRR2DP22532 72 aa3.82□□□□□ -1.8
PABPC1-203ENST00000517921 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
PABPC1-203ENST00000517921 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
PABPC1-203ENST00000517921 MT1LQ93083 61 aa3.79□□□□□ -1.8
PABPC1-203ENST00000517921 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
PABPC1-203ENST00000517921 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
PABPC1-203ENST00000517921 MT1GP13640 62 aa3.69□□□□□ -1.82
PABPC1-203ENST00000517921 MT1MQ8N339 61 aa3.67□□□□□ -1.82
PABPC1-203ENST00000517921 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
PABPC1-203ENST00000517921 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
PABPC1-203ENST00000517921 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
PABPC1-203ENST00000517921 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
PABPC1-203ENST00000517921 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
PABPC1-203ENST00000517921 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
PABPC1-203ENST00000517921 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
PABPC1-203ENST00000517921 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
PABPC1-203ENST00000517921 MT4P47944 62 aa3.35□□□□□ -1.87
PABPC1-203ENST00000517921 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
PABPC1-203ENST00000517921 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
PABPC1-203ENST00000517921 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
PABPC1-203ENST00000517921 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
PABPC1-203ENST00000517921 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
PABPC1-203ENST00000517921 MT1AP04731 61 aa3.22□□□□□ -1.89
PABPC1-203ENST00000517921 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
PABPC1-203ENST00000517921 INE1O15225 51 aa3.15□□□□□ -1.91
PABPC1-203ENST00000517921 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
PABPC1-203ENST00000517921 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
PABPC1-203ENST00000517921 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
PABPC1-203ENST00000517921 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
PABPC1-203ENST00000517921 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
PABPC1-203ENST00000517921 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
PABPC1-203ENST00000517921 MT3P25713 68 aa3.08□□□□□ -1.92
PABPC1-203ENST00000517921 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
PABPC1-203ENST00000517921 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
PABPC1-203ENST00000517921 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
PABPC1-203ENST00000517921 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
PABPC1-203ENST00000517921 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
PABPC1-203ENST00000517921 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
PABPC1-203ENST00000517921 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
PABPC1-203ENST00000517921 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
PABPC1-203ENST00000517921 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
PABPC1-203ENST00000517921 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
PABPC1-203ENST00000517921 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
PABPC1-203ENST00000517921 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
PABPC1-203ENST00000517921 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PABPC1-203ENST00000517921 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PABPC1-203ENST00000517921 PRM1P04553 51 aa2.25□□□□□ -2.05
PABPC1-203ENST00000517921 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
PABPC1-203ENST00000517921 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
PABPC1-203ENST00000517921 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
PABPC1-203ENST00000517921 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
PABPC1-203ENST00000517921 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 445.5 ms