RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TFF3Q07654 80 aa-5.33□□□□□ -3.26
RNU6-1088P-201ENST00000516850 TTTY10Q9BZA0 68 aa-5.34□□□□□ -3.26
RNU6-1088P-201ENST00000516850 CFAP47Q6ZTR5 3102 aa-5.43□□□□□ -3.28
RNU6-1088P-201ENST00000516850 CLTCL1P53675 1640 aa-5.44□□□□□ -3.28
RNU6-1088P-201ENST00000516850 PLNP26678 52 aa-5.44□□□□□ -3.28
RNU6-1088P-201ENST00000516850 PDCD5O14737 125 aa-5.45□□□□□ -3.28
RNU6-1088P-201ENST00000516850 SMIM2Q9BVW6 85 aa-5.45□□□□□ -3.28
RNU6-1088P-201ENST00000516850 SMCO4Q9NRQ5 59 aa-5.46□□□□□ -3.28
RNU6-1088P-201ENST00000516850 USP34Q70CQ2 3546 aa-5.46□□□□□ -3.28
RNU6-1088P-201ENST00000516850 CPS1P31327 1500 aa-5.48□□□□□ -3.29
RNU6-1088P-201ENST00000516850 DNAH12Q6ZR08 3092 aa-5.49□□□□□ -3.29
RNU6-1088P-201ENST00000516850 DDX60Q8IY21 1712 aaKnown RBP-5.49□□□□□ -3.29
RNU6-1088P-201ENST00000516850 ABCA5Q8WWZ7 1642 aa-5.5□□□□□ -3.29
RNU6-1088P-201ENST00000516850 EFCAB5A4FU69 1503 aa-5.53□□□□□ -3.3
RNU6-1088P-201ENST00000516850 ABCA10Q8WWZ4 1543 aa-5.53□□□□□ -3.3
RNU6-1088P-201ENST00000516850 TRPM2O94759 1503 aa-5.54□□□□□ -3.3
RNU6-1088P-201ENST00000516850 XIRP2A4UGR9 3374 aa-5.58□□□□□ -3.3
RNU6-1088P-201ENST00000516850 UNC80Q8N2C7 3258 aa-5.64□□□□□ -3.31
RNU6-1088P-201ENST00000516850 IQGAP1P46940 1657 aa-5.65□□□□□ -3.31
RNU6-1088P-201ENST00000516850 DEFB133Q30KQ1 61 aa-5.65□□□□□ -3.31
RNU6-1088P-201ENST00000516850 RHPN1-AS1Q9BWJ2 59 aa-5.67□□□□□ -3.32
RNU6-1088P-201ENST00000516850 NFAT5O94916 1531 aa-5.76□□□□□ -3.33
RNU6-1088P-201ENST00000516850 LOC400499M0QZD8 3231 aa-5.77□□□□□ -3.33
RNU6-1088P-201ENST00000516850 A0A087WWC5 75 aa-5.78□□□□□ -3.33
RNU6-1088P-201ENST00000516850 KRTAP19-2Q3LHN2 52 aa-5.79□□□□□ -3.34
RNU6-1088P-201ENST00000516850 LINC01590Q5TEZ4 76 aa-5.79□□□□□ -3.34
RNU6-1088P-201ENST00000516850 PRXQ9BXM0 1461 aa-5.79□□□□□ -3.34
RNU6-1088P-201ENST00000516850 TOMM7Q9P0U1 55 aa-5.82□□□□□ -3.34
RNU6-1088P-201ENST00000516850 CD52P31358 61 aa-5.85□□□□□ -3.35
RNU6-1088P-201ENST00000516850 NDUFA1O15239 70 aa-5.87□□□□□ -3.35
RNU6-1088P-201ENST00000516850 HTN1P15515 57 aa-5.88□□□□□ -3.35
RNU6-1088P-201ENST00000516850 SMIM5Q71RC9 77 aa-5.9□□□□□ -3.35
RNU6-1088P-201ENST00000516850 VCANP13611 3396 aa-5.9□□□□□ -3.35
RNU6-1088P-201ENST00000516850 ASPMQ8IZT6 3477 aa-5.9□□□□□ -3.35
RNU6-1088P-201ENST00000516850 ADCY10Q96PN6 1610 aa-5.91□□□□□ -3.36
RNU6-1088P-201ENST00000516850 ABCC8Q09428 1581 aa-5.93□□□□□ -3.36
RNU6-1088P-201ENST00000516850 CENPFP49454 3210 aa-5.95□□□□□ -3.36
RNU6-1088P-201ENST00000516850 A0A096LNI7 61 aa-5.97□□□□□ -3.37
RNU6-1088P-201ENST00000516850 FANCD2Q9BXW9 1451 aa-5.98□□□□□ -3.37
RNU6-1088P-201ENST00000516850 CMC2Q9NRP2 79 aa-6.03□□□□□ -3.37
RNU6-1088P-201ENST00000516850 CDH23Q9H251 3354 aa-6.09□□□□□ -3.38
RNU6-1088P-201ENST00000516850 BRCA2P51587 3418 aa-6.09□□□□□ -3.38
RNU6-1088P-201ENST00000516850 DEFB124Q8NES8 71 aa-6.21□□□□□ -3.4
RNU6-1088P-201ENST00000516850 DUOX1Q9NRD9 1551 aa-6.22□□□□□ -3.4
RNU6-1088P-201ENST00000516850 ERICH3Q5RHP9 1530 aa-6.22□□□□□ -3.41
RNU6-1088P-201ENST00000516850 VPS13AQ96RL7 3174 aa-6.27□□□□□ -3.41
RNU6-1088P-201ENST00000516850 SAMD9LQ8IVG5 1584 aa-6.4□□□□□ -3.43
RNU6-1088P-201ENST00000516850 TOP2AP11388 1531 aaKnown RBP-6.44□□□□□ -3.44
RNU6-1088P-201ENST00000516850 RPL39P62891 51 aaKnown RBP-6.47□□□□□ -3.45
RNU6-1088P-201ENST00000516850 ATP7AQ04656 1500 aa-6.63□□□□□ -3.47
RNU6-1088P-201ENST00000516850 LINC01556Q5JQF7 62 aa-6.66□□□□□ -3.48
RNU6-1088P-201ENST00000516850 MROH2BQ7Z745 1585 aa-6.68□□□□□ -3.48
RNU6-1088P-201ENST00000516850 RPL39LQ96EH5 51 aaKnown RBP-6.7□□□□□ -3.48
RNU6-1088P-201ENST00000516850 UTRNP46939 3433 aa-6.79□□□□□ -3.5
RNU6-1088P-201ENST00000516850 H3BUX3 64 aa-6.85□□□□□ -3.51
RNU6-1088P-201ENST00000516850 DEFB104AQ8WTQ1 72 aa-6.85□□□□□ -3.51
RNU6-1088P-201ENST00000516850 SMIM31A0A1B0GVY4 71 aa-6.89□□□□□ -3.51
RNU6-1088P-201ENST00000516850 SNRPGP15A8MWD9 76 aa-6.98□□□□□ -3.53
RNU6-1088P-201ENST00000516850 IQGAP2Q13576 1575 aa-7.04□□□□□ -3.54
RNU6-1088P-201ENST00000516850 TOMM5Q8N4H5 51 aa-7.34□□□□□ -3.58
RNU6-1088P-201ENST00000516850 K7EIM0 57 aa-7.38□□□□□ -3.59
RNU6-1088P-201ENST00000516850 APELAP0DMC3 54 aa-7.38□□□□□ -3.59
RNU6-1088P-201ENST00000516850 A0A096LPF7 62 aa-7.46□□□□□ -3.6
RNU6-1088P-201ENST00000516850 GOLGB1Q14789 3259 aaKnown RBP-7.47□□□□□ -3.61
RNU6-1088P-201ENST00000516850 ARHGAP5-AS1Q96IT6 56 aa-7.6□□□□□ -3.63
RNU6-1088P-201ENST00000516850 PRCDQ00LT1 54 aa-7.62□□□□□ -3.63
RNU6-1088P-201ENST00000516850 TMEM167AQ8TBQ9 72 aa-7.75□□□□□ -3.65
RNU6-1088P-201ENST00000516850 HTN3P15516 51 aa-7.79□□□□□ -3.66
RNU6-1088P-201ENST00000516850 GCC2Q8IWJ2 1684 aa-8.03□□□□□ -3.69
RNU6-1088P-201ENST00000516850 Q9Y3F1 56 aa-8.15□□□□□ -3.71
RNU6-1088P-201ENST00000516850 SNRPGP62308 76 aaKnown RBP-8.24□□□□□ -3.73
RNU6-1088P-201ENST00000516850 RPL39P5Q59GN2 51 aa-8.38□□□□□ -3.75
RNU6-1088P-201ENST00000516850 H3BSH0 61 aa-8.5□□□□□ -3.77
RNU6-1088P-201ENST00000516850 DEFB108AA8MXU0 73 aa-8.51□□□□□ -3.77
RNU6-1088P-201ENST00000516850 COX14Q96I36 57 aa-8.72□□□□□ -3.81
RNU6-1088P-201ENST00000516850 DEFB108BQ8NET1 73 aa-9.15□□□□□ -3.87
RNU6-1088P-201ENST00000516850 STATHP02808 62 aa-9.8□□□□□ -3.98
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms