RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 UQCR11O14957 56 aa1.48□□□□□ -2.17
SCARNA13-201ENST00000516672 MT1BP07438 61 aa1.46□□□□□ -2.18
SCARNA13-201ENST00000516672 KRTAP25-1Q3LHN0 102 aa1.46□□□□□ -2.18
SCARNA13-201ENST00000516672 KRTAP3-1Q9BYR8 98 aa1.45□□□□□ -2.18
SCARNA13-201ENST00000516672 P0C880 135 aa1.44□□□□□ -2.18
SCARNA13-201ENST00000516672 ROMO1P60602 79 aa1.43□□□□□ -2.18
SCARNA13-201ENST00000516672 H1FX-AS1Q4G0G2 97 aa1.43□□□□□ -2.18
SCARNA13-201ENST00000516672 KRTAP4-8Q9BYQ9 185 aa1.41□□□□□ -2.18
SCARNA13-201ENST00000516672 A0A1B0GU33 70 aa1.4□□□□□ -2.19
SCARNA13-201ENST00000516672 KRTAP13-4Q3LI77 160 aa1.4□□□□□ -2.19
SCARNA13-201ENST00000516672 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SCARNA13-201ENST00000516672 KRTAP3-2Q9BYR7 98 aa1.39□□□□□ -2.19
SCARNA13-201ENST00000516672 KRTAP15-1Q3LI76 137 aa1.38□□□□□ -2.19
SCARNA13-201ENST00000516672 KRTAP3-3Q9BYR6 98 aa1.38□□□□□ -2.19
SCARNA13-201ENST00000516672 CRIPTQ9P021 101 aa1.38□□□□□ -2.19
SCARNA13-201ENST00000516672 S4R3F8 94 aa1.37□□□□□ -2.19
SCARNA13-201ENST00000516672 LCE5AQ5TCM9 118 aa1.36□□□□□ -2.19
SCARNA13-201ENST00000516672 C10orf95Q9H7T3 257 aa1.35□□□□□ -2.19
SCARNA13-201ENST00000516672 OBSCNQ5VST9 7968 aa1.35□□□□□ -2.19
SCARNA13-201ENST00000516672 KRTAP19-8Q3LI54 63 aa1.34□□□□□ -2.19
SCARNA13-201ENST00000516672 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
SCARNA13-201ENST00000516672 KRTAP12-2P59991 146 aa1.33□□□□□ -2.2
SCARNA13-201ENST00000516672 NDUFAF8A1L188 74 aa1.32□□□□□ -2.2
SCARNA13-201ENST00000516672 K7ERS5 55 aa1.32□□□□□ -2.2
SCARNA13-201ENST00000516672 SPRR2GQ9BYE4 73 aa1.32□□□□□ -2.2
SCARNA13-201ENST00000516672 A0A0D9SG42 100 aa1.31□□□□□ -2.2
SCARNA13-201ENST00000516672 SPINT4Q6UDR6 99 aa1.3□□□□□ -2.2
SCARNA13-201ENST00000516672 M0QZ58 72 aa1.27□□□□□ -2.21
SCARNA13-201ENST00000516672 R4GN34 69 aa1.27□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP10-12P60413 245 aa1.26□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP9-6A8MVA2 160 aa1.25□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP10-7P60409 375 aaPredicted RBP1.25□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP5-5Q701N2 237 aaPredicted RBP1.25□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP5-1Q6L8H4 278 aa1.24□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
SCARNA13-201ENST00000516672 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
SCARNA13-201ENST00000516672 PRO2289Q9P1D8 64 aa1.24□□□□□ -2.21
SCARNA13-201ENST00000516672 A0A0A0MQY5 61 aa1.23□□□□□ -2.21
SCARNA13-201ENST00000516672 KRTAP4-3Q9BYR4 195 aa1.21□□□□□ -2.22
SCARNA13-201ENST00000516672 MT1XP80297 61 aa1.2□□□□□ -2.22
SCARNA13-201ENST00000516672 LUZP6Q538Z0 58 aa1.2□□□□□ -2.22
SCARNA13-201ENST00000516672 PP632Q6XCG6 107 aa1.17□□□□□ -2.22
SCARNA13-201ENST00000516672 CAMK2N1Q7Z7J9 78 aa1.17□□□□□ -2.22
SCARNA13-201ENST00000516672 KRTAP4-12Q9BQ66 201 aa1.17□□□□□ -2.22
SCARNA13-201ENST00000516672 KRTAP23-1A1A580 65 aa1.16□□□□□ -2.22
SCARNA13-201ENST00000516672 KRTAP9-4Q9BYQ2 154 aa1.15□□□□□ -2.23
SCARNA13-201ENST00000516672 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
SCARNA13-201ENST00000516672 MT1GP13640 62 aa1.12□□□□□ -2.23
SCARNA13-201ENST00000516672 MT1EP04732 61 aa1.1□□□□□ -2.23
SCARNA13-201ENST00000516672 TNP1P09430 55 aa1.1□□□□□ -2.23
SCARNA13-201ENST00000516672 MT1MQ8N339 61 aa1.1□□□□□ -2.23
SCARNA13-201ENST00000516672 KRTAP5-11Q6L8G4 156 aa1.09□□□□□ -2.23
SCARNA13-201ENST00000516672 KRTAP19-4Q3LI73 84 aa1.08□□□□□ -2.24
SCARNA13-201ENST00000516672 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
SCARNA13-201ENST00000516672 LCE3AQ5TA76 89 aa1.08□□□□□ -2.24
SCARNA13-201ENST00000516672 INE1O15225 51 aa1.06□□□□□ -2.24
SCARNA13-201ENST00000516672 KRTAP19-5Q3LI72 72 aa1.05□□□□□ -2.24
SCARNA13-201ENST00000516672 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
SCARNA13-201ENST00000516672 KRTAP12-3P60328 96 aa1.03□□□□□ -2.24
SCARNA13-201ENST00000516672 MT1LQ93083 61 aa1.02□□□□□ -2.25
SCARNA13-201ENST00000516672 LCE3CQ5T5A8 94 aa0.96□□□□□ -2.26
SCARNA13-201ENST00000516672 LCE1FQ5T754 118 aa0.96□□□□□ -2.26
SCARNA13-201ENST00000516672 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
SCARNA13-201ENST00000516672 LCE1CQ5T751 118 aa0.93□□□□□ -2.26
SCARNA13-201ENST00000516672 LCE1EQ5T753 118 aa0.93□□□□□ -2.26
SCARNA13-201ENST00000516672 LCE1BQ5T7P3 118 aa0.91□□□□□ -2.26
SCARNA13-201ENST00000516672 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
SCARNA13-201ENST00000516672 MT1AP04731 61 aa0.88□□□□□ -2.27
SCARNA13-201ENST00000516672 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
SCARNA13-201ENST00000516672 MT3P25713 68 aa0.82□□□□□ -2.28
SCARNA13-201ENST00000516672 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
SCARNA13-201ENST00000516672 PRM1P04553 51 aa0.75□□□□□ -2.29
SCARNA13-201ENST00000516672 LCE3EQ5T5B0 92 aa0.73□□□□□ -2.29
SCARNA13-201ENST00000516672 LCE3DQ9BYE3 92 aa0.73□□□□□ -2.29
SCARNA13-201ENST00000516672 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.72□□□□□ -2.29
SCARNA13-201ENST00000516672 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms