RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 XIRP2A4UGR9 3374 aa-4.99□□□□□ -3.21
RNU6-561P-201ENST00000516222 DEFB133Q30KQ1 61 aa-5□□□□□ -3.21
RNU6-561P-201ENST00000516222 SMIM2Q9BVW6 85 aa-5□□□□□ -3.21
RNU6-561P-201ENST00000516222 LOC400499M0QZD8 3231 aa-5.01□□□□□ -3.21
RNU6-561P-201ENST00000516222 TFF3Q07654 80 aa-5.07□□□□□ -3.22
RNU6-561P-201ENST00000516222 RHPN1-AS1Q9BWJ2 59 aa-5.07□□□□□ -3.22
RNU6-561P-201ENST00000516222 CD52P31358 61 aa-5.11□□□□□ -3.23
RNU6-561P-201ENST00000516222 RB1CC1Q8TDY2 1594 aa-5.12□□□□□ -3.23
RNU6-561P-201ENST00000516222 CCDC18Q5T9S5 1454 aa-5.12□□□□□ -3.23
RNU6-561P-201ENST00000516222 IQGAP3Q86VI3 1631 aa-5.13□□□□□ -3.23
RNU6-561P-201ENST00000516222 KRTAP19-2Q3LHN2 52 aa-5.14□□□□□ -3.23
RNU6-561P-201ENST00000516222 ASPMQ8IZT6 3477 aa-5.15□□□□□ -3.23
RNU6-561P-201ENST00000516222 CLTCL1P53675 1640 aa-5.15□□□□□ -3.23
RNU6-561P-201ENST00000516222 PLNP26678 52 aa-5.16□□□□□ -3.24
RNU6-561P-201ENST00000516222 CENPFP49454 3210 aa-5.16□□□□□ -3.24
RNU6-561P-201ENST00000516222 TRPM2O94759 1503 aa-5.18□□□□□ -3.24
RNU6-561P-201ENST00000516222 UGGT2Q9NYU1 1516 aa-5.21□□□□□ -3.24
RNU6-561P-201ENST00000516222 HTN1P15515 57 aa-5.21□□□□□ -3.24
RNU6-561P-201ENST00000516222 DDX60Q8IY21 1712 aaKnown RBP-5.21□□□□□ -3.24
RNU6-561P-201ENST00000516222 LINC01590Q5TEZ4 76 aa-5.24□□□□□ -3.25
RNU6-561P-201ENST00000516222 ABCA5Q8WWZ7 1642 aa-5.25□□□□□ -3.25
RNU6-561P-201ENST00000516222 VCANP13611 3396 aa-5.26□□□□□ -3.25
RNU6-561P-201ENST00000516222 CPS1P31327 1500 aa-5.28□□□□□ -3.25
RNU6-561P-201ENST00000516222 BRCA2P51587 3418 aa-5.28□□□□□ -3.25
RNU6-561P-201ENST00000516222 GNG2P59768 71 aa-5.28□□□□□ -3.25
RNU6-561P-201ENST00000516222 CDH23Q9H251 3354 aa-5.3□□□□□ -3.26
RNU6-561P-201ENST00000516222 TOMM7Q9P0U1 55 aa-5.32□□□□□ -3.26
RNU6-561P-201ENST00000516222 A0A096LNI7 61 aa-5.36□□□□□ -3.27
RNU6-561P-201ENST00000516222 PRXQ9BXM0 1461 aa-5.37□□□□□ -3.27
RNU6-561P-201ENST00000516222 PDCD5O14737 125 aa-5.37□□□□□ -3.27
RNU6-561P-201ENST00000516222 ABCA10Q8WWZ4 1543 aa-5.39□□□□□ -3.27
RNU6-561P-201ENST00000516222 IQGAP1P46940 1657 aa-5.43□□□□□ -3.28
RNU6-561P-201ENST00000516222 ADCY10Q96PN6 1610 aa-5.44□□□□□ -3.28
RNU6-561P-201ENST00000516222 VPS13AQ96RL7 3174 aa-5.45□□□□□ -3.28
RNU6-561P-201ENST00000516222 SMCO4Q9NRQ5 59 aa-5.45□□□□□ -3.28
RNU6-561P-201ENST00000516222 NFAT5O94916 1531 aa-5.47□□□□□ -3.28
RNU6-561P-201ENST00000516222 EFCAB5A4FU69 1503 aa-5.48□□□□□ -3.29
RNU6-561P-201ENST00000516222 NDUFA1O15239 70 aa-5.48□□□□□ -3.29
RNU6-561P-201ENST00000516222 DEFB124Q8NES8 71 aa-5.51□□□□□ -3.29
RNU6-561P-201ENST00000516222 A0A087WWC5 75 aa-5.66□□□□□ -3.32
RNU6-561P-201ENST00000516222 ABCC8Q09428 1581 aa-5.67□□□□□ -3.32
RNU6-561P-201ENST00000516222 FANCD2Q9BXW9 1451 aa-5.67□□□□□ -3.32
RNU6-561P-201ENST00000516222 SMIM5Q71RC9 77 aa-5.7□□□□□ -3.32
RNU6-561P-201ENST00000516222 DUOX1Q9NRD9 1551 aa-5.72□□□□□ -3.32
RNU6-561P-201ENST00000516222 CMC2Q9NRP2 79 aa-5.73□□□□□ -3.33
RNU6-561P-201ENST00000516222 ERICH3Q5RHP9 1530 aa-5.74□□□□□ -3.33
RNU6-561P-201ENST00000516222 LINC01556Q5JQF7 62 aa-5.84□□□□□ -3.34
RNU6-561P-201ENST00000516222 TOP2AP11388 1531 aaKnown RBP-5.84□□□□□ -3.34
RNU6-561P-201ENST00000516222 SAMD9LQ8IVG5 1584 aa-5.89□□□□□ -3.35
RNU6-561P-201ENST00000516222 UTRNP46939 3433 aa-5.95□□□□□ -3.36
RNU6-561P-201ENST00000516222 RPL39P62891 51 aaKnown RBP-5.97□□□□□ -3.37
RNU6-561P-201ENST00000516222 ATP7AQ04656 1500 aa-6.03□□□□□ -3.37
RNU6-561P-201ENST00000516222 H3BUX3 64 aa-6.08□□□□□ -3.38
RNU6-561P-201ENST00000516222 MROH2BQ7Z745 1585 aa-6.13□□□□□ -3.39
RNU6-561P-201ENST00000516222 DEFB104AQ8WTQ1 72 aa-6.15□□□□□ -3.39
RNU6-561P-201ENST00000516222 RPL39LQ96EH5 51 aaKnown RBP-6.16□□□□□ -3.4
RNU6-561P-201ENST00000516222 APELAP0DMC3 54 aa-6.48□□□□□ -3.45
RNU6-561P-201ENST00000516222 A0A096LPF7 62 aa-6.57□□□□□ -3.46
RNU6-561P-201ENST00000516222 GOLGB1Q14789 3259 aaKnown RBP-6.61□□□□□ -3.47
RNU6-561P-201ENST00000516222 SNRPGP15A8MWD9 76 aa-6.63□□□□□ -3.47
RNU6-561P-201ENST00000516222 K7EIM0 57 aa-6.64□□□□□ -3.47
RNU6-561P-201ENST00000516222 IQGAP2Q13576 1575 aa-6.66□□□□□ -3.48
RNU6-561P-201ENST00000516222 SMIM31A0A1B0GVY4 71 aa-6.74□□□□□ -3.49
RNU6-561P-201ENST00000516222 PRCDQ00LT1 54 aa-6.76□□□□□ -3.49
RNU6-561P-201ENST00000516222 HTN3P15516 51 aa-6.78□□□□□ -3.49
RNU6-561P-201ENST00000516222 ARHGAP5-AS1Q96IT6 56 aa-6.83□□□□□ -3.5
RNU6-561P-201ENST00000516222 TMEM167AQ8TBQ9 72 aa-6.86□□□□□ -3.51
RNU6-561P-201ENST00000516222 TOMM5Q8N4H5 51 aa-6.89□□□□□ -3.51
RNU6-561P-201ENST00000516222 Q9Y3F1 56 aa-7.09□□□□□ -3.54
RNU6-561P-201ENST00000516222 H3BSH0 61 aa-7.33□□□□□ -3.58
RNU6-561P-201ENST00000516222 SNRPGP62308 76 aaKnown RBP-7.39□□□□□ -3.59
RNU6-561P-201ENST00000516222 GCC2Q8IWJ2 1684 aa-7.44□□□□□ -3.6
RNU6-561P-201ENST00000516222 RPL39P5Q59GN2 51 aa-7.48□□□□□ -3.61
RNU6-561P-201ENST00000516222 COX14Q96I36 57 aa-7.54□□□□□ -3.62
RNU6-561P-201ENST00000516222 DEFB108AA8MXU0 73 aa-7.59□□□□□ -3.62
RNU6-561P-201ENST00000516222 DEFB108BQ8NET1 73 aa-8.01□□□□□ -3.69
RNU6-561P-201ENST00000516222 STATHP02808 62 aa-8.55□□□□□ -3.78
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms