RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 A0A0D9SG42 100 aa3.75□□□□□ -1.81
CSNK1A1-206ENST00000515748 V9GYY9 64 aa3.75□□□□□ -1.81
CSNK1A1-206ENST00000515748 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
CSNK1A1-206ENST00000515748 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
CSNK1A1-206ENST00000515748 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
CSNK1A1-206ENST00000515748 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
CSNK1A1-206ENST00000515748 Q1T7F1 81 aa3.71□□□□□ -1.82
CSNK1A1-206ENST00000515748 MT4P47944 62 aa3.69□□□□□ -1.82
CSNK1A1-206ENST00000515748 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
CSNK1A1-206ENST00000515748 A8MU10 97 aa3.68□□□□□ -1.82
CSNK1A1-206ENST00000515748 UQCR11O14957 56 aa3.67□□□□□ -1.82
CSNK1A1-206ENST00000515748 PSPHP1O15172 72 aa3.61□□□□□ -1.83
CSNK1A1-206ENST00000515748 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
CSNK1A1-206ENST00000515748 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CSNK1A1-206ENST00000515748 A6NED7 52 aa3.53□□□□□ -1.84
CSNK1A1-206ENST00000515748 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
CSNK1A1-206ENST00000515748 K7ERS5 55 aa3.5□□□□□ -1.85
CSNK1A1-206ENST00000515748 TNP1P09430 55 aa3.5□□□□□ -1.85
CSNK1A1-206ENST00000515748 MT1EP04732 61 aa3.47□□□□□ -1.85
CSNK1A1-206ENST00000515748 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
CSNK1A1-206ENST00000515748 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CSNK1A1-206ENST00000515748 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
CSNK1A1-206ENST00000515748 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
CSNK1A1-206ENST00000515748 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
CSNK1A1-206ENST00000515748 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
CSNK1A1-206ENST00000515748 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
CSNK1A1-206ENST00000515748 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
CSNK1A1-206ENST00000515748 H3BS24 57 aa3.38□□□□□ -1.87
CSNK1A1-206ENST00000515748 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
CSNK1A1-206ENST00000515748 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
CSNK1A1-206ENST00000515748 MT1GP13640 62 aa3.34□□□□□ -1.87
CSNK1A1-206ENST00000515748 MT1LQ93083 61 aa3.34□□□□□ -1.87
CSNK1A1-206ENST00000515748 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
CSNK1A1-206ENST00000515748 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
CSNK1A1-206ENST00000515748 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
CSNK1A1-206ENST00000515748 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
CSNK1A1-206ENST00000515748 ROMO1P60602 79 aa3.29□□□□□ -1.88
CSNK1A1-206ENST00000515748 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
CSNK1A1-206ENST00000515748 MT1MQ8N339 61 aa3.28□□□□□ -1.88
CSNK1A1-206ENST00000515748 PMAIP1Q13794 54 aa3.23□□□□□ -1.89
CSNK1A1-206ENST00000515748 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
CSNK1A1-206ENST00000515748 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
CSNK1A1-206ENST00000515748 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
CSNK1A1-206ENST00000515748 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
CSNK1A1-206ENST00000515748 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
CSNK1A1-206ENST00000515748 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
CSNK1A1-206ENST00000515748 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
CSNK1A1-206ENST00000515748 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
CSNK1A1-206ENST00000515748 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
CSNK1A1-206ENST00000515748 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
CSNK1A1-206ENST00000515748 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CSNK1A1-206ENST00000515748 SVIPQ8NHG7 77 aa2.94□□□□□ -1.94
CSNK1A1-206ENST00000515748 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
CSNK1A1-206ENST00000515748 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
CSNK1A1-206ENST00000515748 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
CSNK1A1-206ENST00000515748 MT1AP04731 61 aa2.85□□□□□ -1.95
CSNK1A1-206ENST00000515748 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
CSNK1A1-206ENST00000515748 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
CSNK1A1-206ENST00000515748 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
CSNK1A1-206ENST00000515748 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
CSNK1A1-206ENST00000515748 MT3P25713 68 aa2.59□□□□□ -1.99
CSNK1A1-206ENST00000515748 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
CSNK1A1-206ENST00000515748 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
CSNK1A1-206ENST00000515748 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
CSNK1A1-206ENST00000515748 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
CSNK1A1-206ENST00000515748 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
CSNK1A1-206ENST00000515748 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
CSNK1A1-206ENST00000515748 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
CSNK1A1-206ENST00000515748 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
CSNK1A1-206ENST00000515748 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
CSNK1A1-206ENST00000515748 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
CSNK1A1-206ENST00000515748 INE1O15225 51 aa1.99□□□□□ -2.09
CSNK1A1-206ENST00000515748 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
CSNK1A1-206ENST00000515748 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CSNK1A1-206ENST00000515748 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CSNK1A1-206ENST00000515748 PRM1P04553 51 aa1.67□□□□□ -2.14
CSNK1A1-206ENST00000515748 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms