RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 P0C880 135 aa4.44□□□□□ -1.7
SMAD1-216ENST00000515527 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
SMAD1-216ENST00000515527 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
SMAD1-216ENST00000515527 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
SMAD1-216ENST00000515527 PSPHP1O15172 72 aa4.39□□□□□ -1.71
SMAD1-216ENST00000515527 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
SMAD1-216ENST00000515527 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
SMAD1-216ENST00000515527 A0A1B0GW54 56 aa4.37□□□□□ -1.71
SMAD1-216ENST00000515527 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
SMAD1-216ENST00000515527 JMJD7-PLA2G4BH0Y9G9 81 aa4.36□□□□□ -1.71
SMAD1-216ENST00000515527 NREPQ16612 68 aa4.36□□□□□ -1.71
SMAD1-216ENST00000515527 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
SMAD1-216ENST00000515527 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.71
SMAD1-216ENST00000515527 SPTSSBQ8NFR3 76 aa4.32□□□□□ -1.72
SMAD1-216ENST00000515527 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
SMAD1-216ENST00000515527 SNURFQ9Y675 71 aa4.32□□□□□ -1.72
SMAD1-216ENST00000515527 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
SMAD1-216ENST00000515527 A0A0D9SG42 100 aa4.26□□□□□ -1.73
SMAD1-216ENST00000515527 C14orf132Q9NPU4 83 aa4.26□□□□□ -1.73
SMAD1-216ENST00000515527 A6NED7 52 aa4.25□□□□□ -1.73
SMAD1-216ENST00000515527 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
SMAD1-216ENST00000515527 BPY2O14599 106 aa4.23□□□□□ -1.73
SMAD1-216ENST00000515527 LOC110117498A0A087WWA1 95 aa4.2□□□□□ -1.74
SMAD1-216ENST00000515527 Q8N9L7 120 aa4.19□□□□□ -1.74
SMAD1-216ENST00000515527 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
SMAD1-216ENST00000515527 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
SMAD1-216ENST00000515527 OCR1Q9BZK8 76 aa4.17□□□□□ -1.74
SMAD1-216ENST00000515527 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
SMAD1-216ENST00000515527 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
SMAD1-216ENST00000515527 H3BPC8 53 aa4.12□□□□□ -1.75
SMAD1-216ENST00000515527 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
SMAD1-216ENST00000515527 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
SMAD1-216ENST00000515527 A8MU10 97 aa4.08□□□□□ -1.76
SMAD1-216ENST00000515527 ROMO1P60602 79 aa4.06□□□□□ -1.76
SMAD1-216ENST00000515527 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
SMAD1-216ENST00000515527 TP53AIP1Q9HCN2 124 aa4.04□□□□□ -1.76
SMAD1-216ENST00000515527 K7ERS5 55 aa4.02□□□□□ -1.77
SMAD1-216ENST00000515527 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
SMAD1-216ENST00000515527 H0Y9P7 68 aa4.01□□□□□ -1.77
SMAD1-216ENST00000515527 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
SMAD1-216ENST00000515527 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
SMAD1-216ENST00000515527 COA5Q86WW8 74 aa3.96□□□□□ -1.78
SMAD1-216ENST00000515527 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
SMAD1-216ENST00000515527 UQCR11O14957 56 aa3.93□□□□□ -1.78
SMAD1-216ENST00000515527 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SMAD1-216ENST00000515527 DMAC1Q96GE9 116 aa3.91□□□□□ -1.78
SMAD1-216ENST00000515527 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
SMAD1-216ENST00000515527 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
SMAD1-216ENST00000515527 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SMAD1-216ENST00000515527 MT1AP04731 61 aa3.81□□□□□ -1.8
SMAD1-216ENST00000515527 A0A1B0GU69 56 aa3.79□□□□□ -1.8
SMAD1-216ENST00000515527 ACYP2P14621 99 aa3.76□□□□□ -1.81
SMAD1-216ENST00000515527 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
SMAD1-216ENST00000515527 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
SMAD1-216ENST00000515527 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SMAD1-216ENST00000515527 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
SMAD1-216ENST00000515527 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
SMAD1-216ENST00000515527 A0A1B0GU33 70 aa3.55□□□□□ -1.84
SMAD1-216ENST00000515527 MT3P25713 68 aa3.55□□□□□ -1.84
SMAD1-216ENST00000515527 TNP1P09430 55 aa3.51□□□□□ -1.85
SMAD1-216ENST00000515527 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SMAD1-216ENST00000515527 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SMAD1-216ENST00000515527 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SMAD1-216ENST00000515527 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
SMAD1-216ENST00000515527 INE1O15225 51 aa3.28□□□□□ -1.88
SMAD1-216ENST00000515527 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
SMAD1-216ENST00000515527 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
SMAD1-216ENST00000515527 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SMAD1-216ENST00000515527 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SMAD1-216ENST00000515527 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
SMAD1-216ENST00000515527 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SMAD1-216ENST00000515527 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
SMAD1-216ENST00000515527 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
SMAD1-216ENST00000515527 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
SMAD1-216ENST00000515527 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
SMAD1-216ENST00000515527 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
SMAD1-216ENST00000515527 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
SMAD1-216ENST00000515527 PRM1P04553 51 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 74.5 ms