RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 M0QZ58 72 aa4.13□□□□□ -1.75
NEDD9-215ENST00000514660 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
NEDD9-215ENST00000514660 A0A1B0GU33 70 aa4.12□□□□□ -1.75
NEDD9-215ENST00000514660 R4GN34 69 aa4.12□□□□□ -1.75
NEDD9-215ENST00000514660 V9GYY9 64 aa4.11□□□□□ -1.75
NEDD9-215ENST00000514660 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
NEDD9-215ENST00000514660 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
NEDD9-215ENST00000514660 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
NEDD9-215ENST00000514660 PSPHP1O15172 72 aa4.07□□□□□ -1.76
NEDD9-215ENST00000514660 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
NEDD9-215ENST00000514660 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
NEDD9-215ENST00000514660 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
NEDD9-215ENST00000514660 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
NEDD9-215ENST00000514660 A0A0D9SG42 100 aa4□□□□□ -1.77
NEDD9-215ENST00000514660 UQCR11O14957 56 aa4□□□□□ -1.77
NEDD9-215ENST00000514660 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
NEDD9-215ENST00000514660 A8MU10 97 aa3.99□□□□□ -1.77
NEDD9-215ENST00000514660 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
NEDD9-215ENST00000514660 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
NEDD9-215ENST00000514660 MT1EP04732 61 aa3.95□□□□□ -1.78
NEDD9-215ENST00000514660 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
NEDD9-215ENST00000514660 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
NEDD9-215ENST00000514660 A6NED7 52 aa3.92□□□□□ -1.78
NEDD9-215ENST00000514660 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
NEDD9-215ENST00000514660 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
NEDD9-215ENST00000514660 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
NEDD9-215ENST00000514660 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
NEDD9-215ENST00000514660 MT1GP13640 62 aa3.81□□□□□ -1.8
NEDD9-215ENST00000514660 MT3P25713 68 aa3.8□□□□□ -1.8
NEDD9-215ENST00000514660 MT1MQ8N339 61 aa3.8□□□□□ -1.8
NEDD9-215ENST00000514660 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
NEDD9-215ENST00000514660 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
NEDD9-215ENST00000514660 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
NEDD9-215ENST00000514660 K7ERS5 55 aa3.76□□□□□ -1.81
NEDD9-215ENST00000514660 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
NEDD9-215ENST00000514660 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
NEDD9-215ENST00000514660 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
NEDD9-215ENST00000514660 MT1LQ93083 61 aa3.68□□□□□ -1.82
NEDD9-215ENST00000514660 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
NEDD9-215ENST00000514660 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
NEDD9-215ENST00000514660 TNP1P09430 55 aa3.63□□□□□ -1.83
NEDD9-215ENST00000514660 ROMO1P60602 79 aa3.62□□□□□ -1.83
NEDD9-215ENST00000514660 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
NEDD9-215ENST00000514660 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
NEDD9-215ENST00000514660 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
NEDD9-215ENST00000514660 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
NEDD9-215ENST00000514660 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
NEDD9-215ENST00000514660 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
NEDD9-215ENST00000514660 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
NEDD9-215ENST00000514660 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
NEDD9-215ENST00000514660 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
NEDD9-215ENST00000514660 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
NEDD9-215ENST00000514660 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
NEDD9-215ENST00000514660 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
NEDD9-215ENST00000514660 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
NEDD9-215ENST00000514660 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
NEDD9-215ENST00000514660 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
NEDD9-215ENST00000514660 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
NEDD9-215ENST00000514660 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
NEDD9-215ENST00000514660 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
NEDD9-215ENST00000514660 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
NEDD9-215ENST00000514660 MT1AP04731 61 aa3.09□□□□□ -1.91
NEDD9-215ENST00000514660 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
NEDD9-215ENST00000514660 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
NEDD9-215ENST00000514660 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
NEDD9-215ENST00000514660 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
NEDD9-215ENST00000514660 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
NEDD9-215ENST00000514660 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
NEDD9-215ENST00000514660 LCE1CQ5T751 118 aa2.54□□□□□ -2
NEDD9-215ENST00000514660 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
NEDD9-215ENST00000514660 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
NEDD9-215ENST00000514660 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
NEDD9-215ENST00000514660 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
NEDD9-215ENST00000514660 INE1O15225 51 aa2.08□□□□□ -2.08
NEDD9-215ENST00000514660 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
NEDD9-215ENST00000514660 PRM1P04553 51 aa1.88□□□□□ -2.11
NEDD9-215ENST00000514660 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
NEDD9-215ENST00000514660 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 146.9 ms