RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CENPEQ02224 2701 aa-1.68□□□□□ -2.68
HMGCS1-207ENST00000514610 CMC2Q9NRP2 79 aa-1.69□□□□□ -2.68
HMGCS1-207ENST00000514610 ABCC8Q09428 1581 aa-1.71□□□□□ -2.68
HMGCS1-207ENST00000514610 WDFY3Q8IZQ1 3526 aa-1.71□□□□□ -2.68
HMGCS1-207ENST00000514610 FANCD2Q9BXW9 1451 aa-1.71□□□□□ -2.68
HMGCS1-207ENST00000514610 PCNTO95613 3336 aa-1.72□□□□□ -2.68
HMGCS1-207ENST00000514610 NRXN3Q9Y4C0 1643 aa-1.72□□□□□ -2.68
HMGCS1-207ENST00000514610 CLTCL1P53675 1640 aa-1.73□□□□□ -2.69
HMGCS1-207ENST00000514610 SPEGQ15772 3267 aa-1.74□□□□□ -2.69
HMGCS1-207ENST00000514610 SMIM31A0A1B0GVY4 71 aa-1.75□□□□□ -2.69
HMGCS1-207ENST00000514610 IQGAP1P46940 1657 aa-1.75□□□□□ -2.69
HMGCS1-207ENST00000514610 DMDP11532 3685 aa-1.75□□□□□ -2.69
HMGCS1-207ENST00000514610 NFAT5O94916 1531 aa-1.76□□□□□ -2.69
HMGCS1-207ENST00000514610 NDUFA1O15239 70 aa-1.76□□□□□ -2.69
HMGCS1-207ENST00000514610 DDX60Q8IY21 1712 aaKnown RBP-1.77□□□□□ -2.69
HMGCS1-207ENST00000514610 SZT2Q5T011 3432 aa-1.78□□□□□ -2.69
HMGCS1-207ENST00000514610 CEP250Q9BV73 2442 aa-1.79□□□□□ -2.7
HMGCS1-207ENST00000514610 CEP350Q5VT06 3117 aa-1.81□□□□□ -2.7
HMGCS1-207ENST00000514610 DCHS1Q96JQ0 3298 aa-1.82□□□□□ -2.7
HMGCS1-207ENST00000514610 LOC400499M0QZD8 3231 aa-1.82□□□□□ -2.7
HMGCS1-207ENST00000514610 WDFY4Q6ZS81 3184 aa-1.86□□□□□ -2.71
HMGCS1-207ENST00000514610 LINC01590Q5TEZ4 76 aa-1.89□□□□□ -2.71
HMGCS1-207ENST00000514610 EP400Q96L91 3159 aa-1.91□□□□□ -2.71
HMGCS1-207ENST00000514610 TTTY10Q9BZA0 68 aa-1.92□□□□□ -2.72
HMGCS1-207ENST00000514610 TOMM7Q9P0U1 55 aa-1.92□□□□□ -2.72
HMGCS1-207ENST00000514610 ERICH3Q5RHP9 1530 aa-1.92□□□□□ -2.72
HMGCS1-207ENST00000514610 RHPN1-AS1Q9BWJ2 59 aa-1.93□□□□□ -2.72
HMGCS1-207ENST00000514610 MUC3AQ02505 3323 aa-1.94□□□□□ -2.72
HMGCS1-207ENST00000514610 UNC80Q8N2C7 3258 aa-1.94□□□□□ -2.72
HMGCS1-207ENST00000514610 DNAH12Q6ZR08 3092 aa-1.97□□□□□ -2.72
HMGCS1-207ENST00000514610 SNRPGP15A8MWD9 76 aa-1.97□□□□□ -2.72
HMGCS1-207ENST00000514610 MKI67P46013 3256 aaKnown RBP-1.99□□□□□ -2.73
HMGCS1-207ENST00000514610 VCANP13611 3396 aa-1.99□□□□□ -2.73
HMGCS1-207ENST00000514610 SAMD9LQ8IVG5 1584 aa-1.99□□□□□ -2.73
HMGCS1-207ENST00000514610 DEFB133Q30KQ1 61 aa-2□□□□□ -2.73
HMGCS1-207ENST00000514610 DUOX1Q9NRD9 1551 aa-2.04□□□□□ -2.74
HMGCS1-207ENST00000514610 CFAP47Q6ZTR5 3102 aa-2.06□□□□□ -2.74
HMGCS1-207ENST00000514610 DNAH14Q0VDD8 3507 aa-2.07□□□□□ -2.74
HMGCS1-207ENST00000514610 RPL39P62891 51 aaKnown RBP-2.09□□□□□ -2.74
HMGCS1-207ENST00000514610 XIRP2A4UGR9 3374 aa-2.1□□□□□ -2.75
HMGCS1-207ENST00000514610 CD52P31358 61 aa-2.1□□□□□ -2.75
HMGCS1-207ENST00000514610 USP34Q70CQ2 3546 aa-2.11□□□□□ -2.75
HMGCS1-207ENST00000514610 DEFB124Q8NES8 71 aa-2.11□□□□□ -2.75
HMGCS1-207ENST00000514610 A0A096LNI7 61 aa-2.12□□□□□ -2.75
HMGCS1-207ENST00000514610 HTN1P15515 57 aa-2.12□□□□□ -2.75
HMGCS1-207ENST00000514610 IQGAP2Q13576 1575 aa-2.13□□□□□ -2.75
HMGCS1-207ENST00000514610 KRTAP19-2Q3LHN2 52 aa-2.13□□□□□ -2.75
HMGCS1-207ENST00000514610 ATP7AQ04656 1500 aa-2.13□□□□□ -2.75
HMGCS1-207ENST00000514610 TOP2AP11388 1531 aaKnown RBP-2.14□□□□□ -2.75
HMGCS1-207ENST00000514610 RPL39LQ96EH5 51 aaKnown RBP-2.19□□□□□ -2.76
HMGCS1-207ENST00000514610 TOMM5Q8N4H5 51 aa-2.2□□□□□ -2.76
HMGCS1-207ENST00000514610 MROH2BQ7Z745 1585 aa-2.2□□□□□ -2.76
HMGCS1-207ENST00000514610 CENPFP49454 3210 aa-2.25□□□□□ -2.77
HMGCS1-207ENST00000514610 ASPMQ8IZT6 3477 aa-2.26□□□□□ -2.77
HMGCS1-207ENST00000514610 H3BUX3 64 aa-2.31□□□□□ -2.78
HMGCS1-207ENST00000514610 BRCA2P51587 3418 aa-2.31□□□□□ -2.78
HMGCS1-207ENST00000514610 CDH23Q9H251 3354 aa-2.34□□□□□ -2.78
HMGCS1-207ENST00000514610 DEFB104AQ8WTQ1 72 aa-2.38□□□□□ -2.79
HMGCS1-207ENST00000514610 LINC01556Q5JQF7 62 aa-2.41□□□□□ -2.8
HMGCS1-207ENST00000514610 VPS13AQ96RL7 3174 aa-2.43□□□□□ -2.8
HMGCS1-207ENST00000514610 K7EIM0 57 aa-2.44□□□□□ -2.8
HMGCS1-207ENST00000514610 UTRNP46939 3433 aa-2.56□□□□□ -2.82
HMGCS1-207ENST00000514610 ARHGAP5-AS1Q96IT6 56 aa-2.57□□□□□ -2.82
HMGCS1-207ENST00000514610 PRCDQ00LT1 54 aa-2.62□□□□□ -2.83
HMGCS1-207ENST00000514610 SNRPGP62308 76 aaKnown RBP-2.63□□□□□ -2.83
HMGCS1-207ENST00000514610 GOLGB1Q14789 3259 aaKnown RBP-2.64□□□□□ -2.83
HMGCS1-207ENST00000514610 GCC2Q8IWJ2 1684 aa-2.66□□□□□ -2.83
HMGCS1-207ENST00000514610 APELAP0DMC3 54 aa-2.66□□□□□ -2.84
HMGCS1-207ENST00000514610 A0A096LPF7 62 aa-2.7□□□□□ -2.84
HMGCS1-207ENST00000514610 TMEM167AQ8TBQ9 72 aa-2.73□□□□□ -2.85
HMGCS1-207ENST00000514610 HTN3P15516 51 aa-2.81□□□□□ -2.86
HMGCS1-207ENST00000514610 Q9Y3F1 56 aa-2.89□□□□□ -2.87
HMGCS1-207ENST00000514610 RPL39P5Q59GN2 51 aa-2.92□□□□□ -2.88
HMGCS1-207ENST00000514610 DEFB108AA8MXU0 73 aa-3□□□□□ -2.89
HMGCS1-207ENST00000514610 H3BSH0 61 aa-3.02□□□□□ -2.89
HMGCS1-207ENST00000514610 COX14Q96I36 57 aa-3.14□□□□□ -2.91
HMGCS1-207ENST00000514610 DEFB108BQ8NET1 73 aa-3.29□□□□□ -2.94
HMGCS1-207ENST00000514610 STATHP02808 62 aa-3.59□□□□□ -2.98
Retrieved 78 of 20,778 RNA–protein pairs in 176.8 ms