RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ROMO1P60602 79 aa3.32□□□□□ -1.88
NEDD4-210ENST00000513957 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
NEDD4-210ENST00000513957 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
NEDD4-210ENST00000513957 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
NEDD4-210ENST00000513957 SPATA8Q6RVD6 105 aa3.28□□□□□ -1.88
NEDD4-210ENST00000513957 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
NEDD4-210ENST00000513957 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
NEDD4-210ENST00000513957 A0A0D9SG42 100 aa3.26□□□□□ -1.89
NEDD4-210ENST00000513957 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
NEDD4-210ENST00000513957 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
NEDD4-210ENST00000513957 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
NEDD4-210ENST00000513957 KMT2DO14686 5537 aa3.25□□□□□ -1.89
NEDD4-210ENST00000513957 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
NEDD4-210ENST00000513957 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
NEDD4-210ENST00000513957 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
NEDD4-210ENST00000513957 UQCR11O14957 56 aa3.2□□□□□ -1.9
NEDD4-210ENST00000513957 NEBP20929 6669 aa3.19□□□□□ -1.9
NEDD4-210ENST00000513957 SPRR2EP22531 72 aa3.17□□□□□ -1.9
NEDD4-210ENST00000513957 SPRR2BP35325 72 aa3.17□□□□□ -1.9
NEDD4-210ENST00000513957 SPRR2AP35326 72 aa3.17□□□□□ -1.9
NEDD4-210ENST00000513957 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
NEDD4-210ENST00000513957 Q1T7F1 81 aa3.14□□□□□ -1.91
NEDD4-210ENST00000513957 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
NEDD4-210ENST00000513957 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
NEDD4-210ENST00000513957 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
NEDD4-210ENST00000513957 MIR22HGQ0VDD5 57 aa3.11□□□□□ -1.91
NEDD4-210ENST00000513957 TNP1P09430 55 aa3.1□□□□□ -1.91
NEDD4-210ENST00000513957 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
NEDD4-210ENST00000513957 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
NEDD4-210ENST00000513957 SPRR2DP22532 72 aa3.06□□□□□ -1.92
NEDD4-210ENST00000513957 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
NEDD4-210ENST00000513957 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
NEDD4-210ENST00000513957 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
NEDD4-210ENST00000513957 MT1EP04732 61 aa3.04□□□□□ -1.92
NEDD4-210ENST00000513957 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
NEDD4-210ENST00000513957 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
NEDD4-210ENST00000513957 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
NEDD4-210ENST00000513957 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
NEDD4-210ENST00000513957 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
NEDD4-210ENST00000513957 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
NEDD4-210ENST00000513957 MT1GP13640 62 aa2.96□□□□□ -1.94
NEDD4-210ENST00000513957 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
NEDD4-210ENST00000513957 MT1LQ93083 61 aa2.92□□□□□ -1.94
NEDD4-210ENST00000513957 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
NEDD4-210ENST00000513957 MT1MQ8N339 61 aa2.88□□□□□ -1.95
NEDD4-210ENST00000513957 INE1O15225 51 aa2.87□□□□□ -1.95
NEDD4-210ENST00000513957 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
NEDD4-210ENST00000513957 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
NEDD4-210ENST00000513957 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
NEDD4-210ENST00000513957 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
NEDD4-210ENST00000513957 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
NEDD4-210ENST00000513957 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-210ENST00000513957 MT4P47944 62 aa2.63□□□□□ -1.99
NEDD4-210ENST00000513957 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
NEDD4-210ENST00000513957 KRTAP12-4P60329 112 aa2.58□□□□□ -2
NEDD4-210ENST00000513957 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
NEDD4-210ENST00000513957 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
NEDD4-210ENST00000513957 MT1AP04731 61 aa2.5□□□□□ -2.01
NEDD4-210ENST00000513957 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
NEDD4-210ENST00000513957 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
NEDD4-210ENST00000513957 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
NEDD4-210ENST00000513957 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
NEDD4-210ENST00000513957 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
NEDD4-210ENST00000513957 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
NEDD4-210ENST00000513957 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
NEDD4-210ENST00000513957 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
NEDD4-210ENST00000513957 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
NEDD4-210ENST00000513957 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
NEDD4-210ENST00000513957 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
NEDD4-210ENST00000513957 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
NEDD4-210ENST00000513957 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
NEDD4-210ENST00000513957 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
NEDD4-210ENST00000513957 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
NEDD4-210ENST00000513957 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
NEDD4-210ENST00000513957 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
NEDD4-210ENST00000513957 PRM1P04553 51 aa1.43□□□□□ -2.18
NEDD4-210ENST00000513957 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
NEDD4-210ENST00000513957 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 68.1 ms