RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ACYP1P07311 99 aa1.47□□□□□ -2.17
PDLIM5-218ENST00000513341 MT1XP80297 61 aa1.47□□□□□ -2.17
PDLIM5-218ENST00000513341 SPINT4Q6UDR6 99 aa1.47□□□□□ -2.17
PDLIM5-218ENST00000513341 Q6ZQT0 140 aa1.47□□□□□ -2.17
PDLIM5-218ENST00000513341 CYP4F30PQ9H0H9 118 aa1.47□□□□□ -2.17
PDLIM5-218ENST00000513341 ORMDL1Q9P0S3 153 aa1.47□□□□□ -2.17
PDLIM5-218ENST00000513341 BAALC-AS2P0C853 105 aa1.46□□□□□ -2.18
PDLIM5-218ENST00000513341 PLAC4Q8WY50 150 aa1.46□□□□□ -2.18
PDLIM5-218ENST00000513341 K7EQZ3 153 aa1.45□□□□□ -2.18
PDLIM5-218ENST00000513341 LINC00643Q86TS7 51 aa1.45□□□□□ -2.18
PDLIM5-218ENST00000513341 TMEM254Q8TBM7 123 aa1.45□□□□□ -2.18
PDLIM5-218ENST00000513341 A0A1B0GU33 70 aa1.44□□□□□ -2.18
PDLIM5-218ENST00000513341 CDC42SE1Q9NRR8 79 aa1.44□□□□□ -2.18
PDLIM5-218ENST00000513341 S4R3F8 94 aa1.44□□□□□ -2.18
PDLIM5-218ENST00000513341 HCG22E2RYF7 251 aa1.43□□□□□ -2.18
PDLIM5-218ENST00000513341 H7BZZ5 65 aa1.43□□□□□ -2.18
PDLIM5-218ENST00000513341 PDE6GP18545 87 aa1.43□□□□□ -2.18
PDLIM5-218ENST00000513341 ATXN8Q156A1 80 aa1.43□□□□□ -2.18
PDLIM5-218ENST00000513341 SPTSSBQ8NFR3 76 aa1.43□□□□□ -2.18
PDLIM5-218ENST00000513341 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
PDLIM5-218ENST00000513341 JMJD7-PLA2G4BH0Y9G9 81 aa1.42□□□□□ -2.18
PDLIM5-218ENST00000513341 MT4P47944 62 aa1.42□□□□□ -2.18
PDLIM5-218ENST00000513341 CYSTM1Q9H1C7 97 aa1.42□□□□□ -2.18
PDLIM5-218ENST00000513341 LOC110117498A0A087WWA1 95 aa1.41□□□□□ -2.18
PDLIM5-218ENST00000513341 H0YAA0 97 aa1.41□□□□□ -2.18
PDLIM5-218ENST00000513341 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
PDLIM5-218ENST00000513341 TRAV22A0A0B4J277 110 aa1.4□□□□□ -2.19
PDLIM5-218ENST00000513341 NREPQ16612 68 aa1.4□□□□□ -2.19
PDLIM5-218ENST00000513341 CHKB-CPT1BH3BT56 60 aa1.39□□□□□ -2.19
PDLIM5-218ENST00000513341 R4GN34 69 aa1.39□□□□□ -2.19
PDLIM5-218ENST00000513341 KRTAP25-1Q3LHN0 102 aa1.38□□□□□ -2.19
PDLIM5-218ENST00000513341 ATP5EP2Q5VTU8 51 aa1.38□□□□□ -2.19
PDLIM5-218ENST00000513341 KRTAP19-3Q7Z4W3 81 aa1.38□□□□□ -2.19
PDLIM5-218ENST00000513341 DMAC1Q96GE9 116 aa1.38□□□□□ -2.19
PDLIM5-218ENST00000513341 MMP24-AS1A0A0U1RRL7 71 aa1.37□□□□□ -2.19
PDLIM5-218ENST00000513341 LOC101927531A0A1B0GV80 90 aa1.37□□□□□ -2.19
PDLIM5-218ENST00000513341 P0C880 135 aa1.37□□□□□ -2.19
PDLIM5-218ENST00000513341 C20orf197Q8N268 126 aa1.37□□□□□ -2.19
PDLIM5-218ENST00000513341 MT1GP13640 62 aa1.36□□□□□ -2.19
PDLIM5-218ENST00000513341 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
PDLIM5-218ENST00000513341 KRTAP12-4P60329 112 aa1.34□□□□□ -2.19
PDLIM5-218ENST00000513341 UBL5Q9BZL1 73 aa1.34□□□□□ -2.19
PDLIM5-218ENST00000513341 KRTAP19-7Q3SYF9 63 aa1.33□□□□□ -2.2
PDLIM5-218ENST00000513341 MT1EP04732 61 aa1.32□□□□□ -2.2
PDLIM5-218ENST00000513341 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
PDLIM5-218ENST00000513341 PRR15LQ9BU68 103 aa1.31□□□□□ -2.2
PDLIM5-218ENST00000513341 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
PDLIM5-218ENST00000513341 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
PDLIM5-218ENST00000513341 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
PDLIM5-218ENST00000513341 A0A087WVE0 104 aa1.29□□□□□ -2.2
PDLIM5-218ENST00000513341 M0QZ58 72 aa1.29□□□□□ -2.2
PDLIM5-218ENST00000513341 UQCR11O14957 56 aa1.28□□□□□ -2.2
PDLIM5-218ENST00000513341 MT1MQ8N339 61 aa1.28□□□□□ -2.2
PDLIM5-218ENST00000513341 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
PDLIM5-218ENST00000513341 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
PDLIM5-218ENST00000513341 H0Y9P7 68 aa1.26□□□□□ -2.21
PDLIM5-218ENST00000513341 LINC00208Q96KT6 92 aa1.25□□□□□ -2.21
PDLIM5-218ENST00000513341 SYNE1Q8NF91 8797 aaKnown RBP1.25□□□□□ -2.21
PDLIM5-218ENST00000513341 INE1O15225 51 aa1.23□□□□□ -2.21
PDLIM5-218ENST00000513341 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
PDLIM5-218ENST00000513341 MT1LQ93083 61 aa1.23□□□□□ -2.21
PDLIM5-218ENST00000513341 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
PDLIM5-218ENST00000513341 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
PDLIM5-218ENST00000513341 A0A0D9SG42 100 aa1.2□□□□□ -2.22
PDLIM5-218ENST00000513341 ACYP2P14621 99 aa1.2□□□□□ -2.22
PDLIM5-218ENST00000513341 COA5Q86WW8 74 aa1.2□□□□□ -2.22
PDLIM5-218ENST00000513341 A0A1B0GU69 56 aa1.17□□□□□ -2.22
PDLIM5-218ENST00000513341 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
PDLIM5-218ENST00000513341 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
PDLIM5-218ENST00000513341 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
PDLIM5-218ENST00000513341 MT1AP04731 61 aa1.05□□□□□ -2.24
PDLIM5-218ENST00000513341 TNP1P09430 55 aa1.05□□□□□ -2.24
PDLIM5-218ENST00000513341 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
PDLIM5-218ENST00000513341 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
PDLIM5-218ENST00000513341 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
PDLIM5-218ENST00000513341 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
PDLIM5-218ENST00000513341 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
PDLIM5-218ENST00000513341 PRM1P04553 51 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms