RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 LINC00208Q96KT6 92 aa2.29□□□□□ -2.04
GYPB-213ENST00000513128 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
GYPB-213ENST00000513128 F8W1H4 67 aa2.28□□□□□ -2.04
GYPB-213ENST00000513128 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
GYPB-213ENST00000513128 GTF2H5Q6ZYL4 71 aa2.26□□□□□ -2.05
GYPB-213ENST00000513128 C20orf197Q8N268 126 aa2.26□□□□□ -2.05
GYPB-213ENST00000513128 ATP5EP2Q5VTU8 51 aa2.25□□□□□ -2.05
GYPB-213ENST00000513128 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
GYPB-213ENST00000513128 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
GYPB-213ENST00000513128 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
GYPB-213ENST00000513128 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
GYPB-213ENST00000513128 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
GYPB-213ENST00000513128 LINC00643Q86TS7 51 aa2.2□□□□□ -2.06
GYPB-213ENST00000513128 COA5Q86WW8 74 aa2.2□□□□□ -2.06
GYPB-213ENST00000513128 MT-ATP8P03928 68 aa2.19□□□□□ -2.06
GYPB-213ENST00000513128 MT1EP04732 61 aa2.19□□□□□ -2.06
GYPB-213ENST00000513128 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
GYPB-213ENST00000513128 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
GYPB-213ENST00000513128 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
GYPB-213ENST00000513128 CCDC179H3BU77 68 aa2.17□□□□□ -2.06
GYPB-213ENST00000513128 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
GYPB-213ENST00000513128 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
GYPB-213ENST00000513128 MT4P47944 62 aa2.15□□□□□ -2.07
GYPB-213ENST00000513128 CYSTM1Q9H1C7 97 aa2.14□□□□□ -2.07
GYPB-213ENST00000513128 ACYP2P14621 99 aa2.13□□□□□ -2.07
GYPB-213ENST00000513128 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
GYPB-213ENST00000513128 MT1GP13640 62 aa2.11□□□□□ -2.07
GYPB-213ENST00000513128 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
GYPB-213ENST00000513128 COX7CP15954 63 aa2.1□□□□□ -2.07
GYPB-213ENST00000513128 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
GYPB-213ENST00000513128 MT1MQ8N339 61 aa2.1□□□□□ -2.07
GYPB-213ENST00000513128 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
GYPB-213ENST00000513128 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
GYPB-213ENST00000513128 A0A0D9SG42 100 aa2.09□□□□□ -2.07
GYPB-213ENST00000513128 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
GYPB-213ENST00000513128 CHKB-CPT1BH3BT56 60 aa2.08□□□□□ -2.08
GYPB-213ENST00000513128 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
GYPB-213ENST00000513128 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
GYPB-213ENST00000513128 MT1LQ93083 61 aa2.07□□□□□ -2.08
GYPB-213ENST00000513128 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
GYPB-213ENST00000513128 SNURFQ9Y675 71 aa2.04□□□□□ -2.08
GYPB-213ENST00000513128 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
GYPB-213ENST00000513128 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.08
GYPB-213ENST00000513128 INE1O15225 51 aa2.02□□□□□ -2.09
GYPB-213ENST00000513128 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
GYPB-213ENST00000513128 LCE3AQ5TA76 89 aa2□□□□□ -2.09
GYPB-213ENST00000513128 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
GYPB-213ENST00000513128 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
GYPB-213ENST00000513128 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
GYPB-213ENST00000513128 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
GYPB-213ENST00000513128 TNP1P09430 55 aa1.91□□□□□ -2.1
GYPB-213ENST00000513128 SERP2Q8N6R1 65 aa1.91□□□□□ -2.1
GYPB-213ENST00000513128 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
GYPB-213ENST00000513128 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
GYPB-213ENST00000513128 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
GYPB-213ENST00000513128 A0A1B0GU69 56 aa1.85□□□□□ -2.11
GYPB-213ENST00000513128 H7BZZ5 65 aa1.84□□□□□ -2.11
GYPB-213ENST00000513128 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
GYPB-213ENST00000513128 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
GYPB-213ENST00000513128 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
GYPB-213ENST00000513128 ATP5EP56381 51 aaPredicted RBP1.76□□□□□ -2.13
GYPB-213ENST00000513128 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
GYPB-213ENST00000513128 MT1AP04731 61 aa1.75□□□□□ -2.13
GYPB-213ENST00000513128 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
GYPB-213ENST00000513128 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
GYPB-213ENST00000513128 PRR15LQ9BU68 103 aa1.71□□□□□ -2.14
GYPB-213ENST00000513128 LINC01558Q9Y6Z2 57 aa1.71□□□□□ -2.14
GYPB-213ENST00000513128 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
GYPB-213ENST00000513128 UQCR11O14957 56 aa1.68□□□□□ -2.14
GYPB-213ENST00000513128 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
GYPB-213ENST00000513128 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
GYPB-213ENST00000513128 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
GYPB-213ENST00000513128 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
GYPB-213ENST00000513128 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
GYPB-213ENST00000513128 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
GYPB-213ENST00000513128 PRM1P04553 51 aa0.78□□□□□ -2.28
GYPB-213ENST00000513128 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms