RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
MSH3-203ENST00000512531 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
MSH3-203ENST00000512531 TNP1P09430 55 aa4.16□□□□□ -1.74
MSH3-203ENST00000512531 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
MSH3-203ENST00000512531 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
MSH3-203ENST00000512531 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
MSH3-203ENST00000512531 NEBP20929 6669 aa4.12□□□□□ -1.75
MSH3-203ENST00000512531 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
MSH3-203ENST00000512531 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
MSH3-203ENST00000512531 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
MSH3-203ENST00000512531 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
MSH3-203ENST00000512531 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
MSH3-203ENST00000512531 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
MSH3-203ENST00000512531 MT1BP07438 61 aa3.93□□□□□ -1.78
MSH3-203ENST00000512531 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
MSH3-203ENST00000512531 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
MSH3-203ENST00000512531 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
MSH3-203ENST00000512531 KMT2DO14686 5537 aa3.91□□□□□ -1.78
MSH3-203ENST00000512531 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
MSH3-203ENST00000512531 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
MSH3-203ENST00000512531 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
MSH3-203ENST00000512531 MT1XP80297 61 aa3.78□□□□□ -1.8
MSH3-203ENST00000512531 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
MSH3-203ENST00000512531 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
MSH3-203ENST00000512531 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
MSH3-203ENST00000512531 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
MSH3-203ENST00000512531 SPRR2EP22531 72 aa3.72□□□□□ -1.81
MSH3-203ENST00000512531 SPRR2BP35325 72 aa3.72□□□□□ -1.81
MSH3-203ENST00000512531 SPRR2AP35326 72 aa3.72□□□□□ -1.81
MSH3-203ENST00000512531 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
MSH3-203ENST00000512531 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
MSH3-203ENST00000512531 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
MSH3-203ENST00000512531 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
MSH3-203ENST00000512531 SPRR2DP22532 72 aa3.61□□□□□ -1.83
MSH3-203ENST00000512531 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
MSH3-203ENST00000512531 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
MSH3-203ENST00000512531 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
MSH3-203ENST00000512531 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
MSH3-203ENST00000512531 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
MSH3-203ENST00000512531 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
MSH3-203ENST00000512531 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
MSH3-203ENST00000512531 MT1EP04732 61 aa3.32□□□□□ -1.88
MSH3-203ENST00000512531 MT1LQ93083 61 aa3.29□□□□□ -1.88
MSH3-203ENST00000512531 INE1O15225 51 aa3.28□□□□□ -1.88
MSH3-203ENST00000512531 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
MSH3-203ENST00000512531 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
MSH3-203ENST00000512531 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
MSH3-203ENST00000512531 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
MSH3-203ENST00000512531 MT1GP13640 62 aa3.23□□□□□ -1.89
MSH3-203ENST00000512531 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
MSH3-203ENST00000512531 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
MSH3-203ENST00000512531 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
MSH3-203ENST00000512531 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
MSH3-203ENST00000512531 MT4P47944 62 aa3.14□□□□□ -1.91
MSH3-203ENST00000512531 MT1MQ8N339 61 aa3.12□□□□□ -1.91
MSH3-203ENST00000512531 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
MSH3-203ENST00000512531 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
MSH3-203ENST00000512531 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
MSH3-203ENST00000512531 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
MSH3-203ENST00000512531 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
MSH3-203ENST00000512531 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
MSH3-203ENST00000512531 MT1AP04731 61 aa2.84□□□□□ -1.95
MSH3-203ENST00000512531 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
MSH3-203ENST00000512531 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
MSH3-203ENST00000512531 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
MSH3-203ENST00000512531 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
MSH3-203ENST00000512531 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
MSH3-203ENST00000512531 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
MSH3-203ENST00000512531 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
MSH3-203ENST00000512531 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
MSH3-203ENST00000512531 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
MSH3-203ENST00000512531 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
MSH3-203ENST00000512531 PRM1P04553 51 aa2.34□□□□□ -2.03
MSH3-203ENST00000512531 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
MSH3-203ENST00000512531 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
MSH3-203ENST00000512531 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
MSH3-203ENST00000512531 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
MSH3-203ENST00000512531 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 120.5 ms