RNA–Protein interactions for RNA: ENST00000512472.5

POLR1C-209, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-209ENST00000512472 SPRR2AP35326 72 aa5.54□□□□□ -1.52
POLR1C-209ENST00000512472 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
POLR1C-209ENST00000512472 ROMO1P60602 79 aa5.52□□□□□ -1.53
POLR1C-209ENST00000512472 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
POLR1C-209ENST00000512472 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
POLR1C-209ENST00000512472 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
POLR1C-209ENST00000512472 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
POLR1C-209ENST00000512472 H3BS24 57 aa5.42□□□□□ -1.54
POLR1C-209ENST00000512472 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
POLR1C-209ENST00000512472 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
POLR1C-209ENST00000512472 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
POLR1C-209ENST00000512472 SPRR2DP22532 72 aa5.36□□□□□ -1.55
POLR1C-209ENST00000512472 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
POLR1C-209ENST00000512472 TNP1P09430 55 aa5.34□□□□□ -1.55
POLR1C-209ENST00000512472 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
POLR1C-209ENST00000512472 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
POLR1C-209ENST00000512472 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
POLR1C-209ENST00000512472 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
POLR1C-209ENST00000512472 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
POLR1C-209ENST00000512472 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
POLR1C-209ENST00000512472 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
POLR1C-209ENST00000512472 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
POLR1C-209ENST00000512472 MT1EP04732 61 aa5.17□□□□□ -1.58
POLR1C-209ENST00000512472 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
POLR1C-209ENST00000512472 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
POLR1C-209ENST00000512472 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
POLR1C-209ENST00000512472 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
POLR1C-209ENST00000512472 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
POLR1C-209ENST00000512472 MT1GP13640 62 aa5.01□□□□□ -1.61
POLR1C-209ENST00000512472 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
POLR1C-209ENST00000512472 MT1LQ93083 61 aa4.95□□□□□ -1.62
POLR1C-209ENST00000512472 MT1MQ8N339 61 aa4.92□□□□□ -1.62
POLR1C-209ENST00000512472 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
POLR1C-209ENST00000512472 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
POLR1C-209ENST00000512472 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
POLR1C-209ENST00000512472 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
POLR1C-209ENST00000512472 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
POLR1C-209ENST00000512472 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.65
POLR1C-209ENST00000512472 MT4P47944 62 aa4.65□□□□□ -1.67
POLR1C-209ENST00000512472 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
POLR1C-209ENST00000512472 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
POLR1C-209ENST00000512472 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
POLR1C-209ENST00000512472 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
POLR1C-209ENST00000512472 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
POLR1C-209ENST00000512472 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
POLR1C-209ENST00000512472 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
POLR1C-209ENST00000512472 KRTAP12-4P60329 112 aa4.4□□□□□ -1.71
POLR1C-209ENST00000512472 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
POLR1C-209ENST00000512472 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
POLR1C-209ENST00000512472 MT1AP04731 61 aa4.23□□□□□ -1.73
POLR1C-209ENST00000512472 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
POLR1C-209ENST00000512472 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
POLR1C-209ENST00000512472 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
POLR1C-209ENST00000512472 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
POLR1C-209ENST00000512472 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
POLR1C-209ENST00000512472 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
POLR1C-209ENST00000512472 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
POLR1C-209ENST00000512472 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
POLR1C-209ENST00000512472 MT3P25713 68 aa3.87□□□□□ -1.79
POLR1C-209ENST00000512472 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
POLR1C-209ENST00000512472 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
POLR1C-209ENST00000512472 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
POLR1C-209ENST00000512472 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
POLR1C-209ENST00000512472 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
POLR1C-209ENST00000512472 INE1O15225 51 aa3.57□□□□□ -1.84
POLR1C-209ENST00000512472 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
POLR1C-209ENST00000512472 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
POLR1C-209ENST00000512472 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
POLR1C-209ENST00000512472 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
POLR1C-209ENST00000512472 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
POLR1C-209ENST00000512472 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
POLR1C-209ENST00000512472 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
POLR1C-209ENST00000512472 PRM1P04553 51 aa2.81□□□□□ -1.96
POLR1C-209ENST00000512472 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
POLR1C-209ENST00000512472 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
POLR1C-209ENST00000512472 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
POLR1C-209ENST00000512472 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
POLR1C-209ENST00000512472 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 37.3 ms