RNA–Protein interactions for RNA: ENST00000512423.1

CUL9-215, Transcript of cullin 9, human

TSL 3

Gene CUL9, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL9-215	ENST00000512423	LCE1D	Q5T752	114 aa		5.02	□□□□□ -1.61
CUL9-215	ENST00000512423	KRTAP19-7	Q3SYF9	63 aa		4.99	□□□□□ -1.61
CUL9-215	ENST00000512423	HMCN1	Q96RW7	5635 aa		4.99	□□□□□ -1.61
CUL9-215	ENST00000512423	KRTAP19-3	Q7Z4W3	81 aa		4.97	□□□□□ -1.61
CUL9-215	ENST00000512423	MT1E	P04732	61 aa		4.96	□□□□□ -1.62
CUL9-215	ENST00000512423	AHNAK2	Q8IVF2	5795 aa		4.95	□□□□□ -1.62
CUL9-215	ENST00000512423	MT4	P47944	62 aa		4.95	□□□□□ -1.62
CUL9-215	ENST00000512423	PRO0628	Q9UI54	55 aa		4.93	□□□□□ -1.62
CUL9-215	ENST00000512423	LCE4A	Q5TA78	99 aa		4.85	□□□□□ -1.63
CUL9-215	ENST00000512423	C10orf95	Q9H7T3	257 aa		4.85	□□□□□ -1.63
CUL9-215	ENST00000512423	PMAIP1	Q13794	54 aa		4.84	□□□□□ -1.63
CUL9-215	ENST00000512423	ROMO1	P60602	79 aa		4.83	□□□□□ -1.64
CUL9-215	ENST00000512423	KRTAP5-10	Q6L8G5	202 aa		4.82	□□□□□ -1.64
CUL9-215	ENST00000512423	MT1G	P13640	62 aa		4.8	□□□□□ -1.64
CUL9-215	ENST00000512423	KRTAP19-5	Q3LI72	72 aa		4.78	□□□□□ -1.64
CUL9-215	ENST00000512423	KRTAP4-6	Q9BYQ5	205 aa		4.77	□□□□□ -1.65
CUL9-215	ENST00000512423	MT1M	Q8N339	61 aa		4.76	□□□□□ -1.65
CUL9-215	ENST00000512423	TNP1	P09430	55 aa		4.75	□□□□□ -1.65
CUL9-215	ENST00000512423	PP632	Q6XCG6	107 aa		4.74	□□□□□ -1.65
CUL9-215	ENST00000512423	KRTAP4-3	Q9BYR4	195 aa		4.74	□□□□□ -1.65
CUL9-215	ENST00000512423	KRTAP25-1	Q3LHN0	102 aa		4.72	□□□□□ -1.65
CUL9-215	ENST00000512423	KRTAP5-4	Q6L8H1	288 aa		4.71	□□□□□ -1.66
CUL9-215	ENST00000512423	KRTAP5-7	Q6L8G8	165 aa		4.67	□□□□□ -1.66
CUL9-215	ENST00000512423	MT1L	Q93083	61 aa		4.67	□□□□□ -1.66
CUL9-215	ENST00000512423	KRTAP5-3	Q6L8H2	238 aa		4.64	□□□□□ -1.67
CUL9-215	ENST00000512423	LOC100996750	A0A140TA64	210 aa		4.63	□□□□□ -1.67
CUL9-215	ENST00000512423	KTN1-AS1	Q86SY8	53 aa		4.59	□□□□□ -1.67
CUL9-215	ENST00000512423	KRTAP23-1	A1A580	65 aa		4.56	□□□□□ -1.68
CUL9-215	ENST00000512423	LCE3A	Q5TA76	89 aa		4.56	□□□□□ -1.68
CUL9-215	ENST00000512423	SPRR5	A0A1B0GTR4	108 aa		4.54	□□□□□ -1.68
CUL9-215	ENST00000512423	PRAC1	Q96KF2	57 aa		4.54	□□□□□ -1.68
CUL9-215	ENST00000512423		H3BS24	57 aa		4.52	□□□□□ -1.69
CUL9-215	ENST00000512423	KRTAP4-7	Q9BYR0	210 aa		4.52	□□□□□ -1.69
CUL9-215	ENST00000512423	KRTAP20-2	Q3LI61	65 aa		4.5	□□□□□ -1.69
CUL9-215	ENST00000512423	KRTAP12-3	P60328	96 aa		4.39	□□□□□ -1.71
CUL9-215	ENST00000512423	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.37	□□□□□ -1.71
CUL9-215	ENST00000512423	SYNE1	Q8NF91	8797 aa	Known RBP	4.36	□□□□□ -1.71
CUL9-215	ENST00000512423	SVIP	Q8NHG7	77 aa		4.35	□□□□□ -1.71
CUL9-215	ENST00000512423	KRTAP12-4	P60329	112 aa		4.32	□□□□□ -1.72
CUL9-215	ENST00000512423	KRTAP15-1	Q3LI76	137 aa		4.27	□□□□□ -1.73
CUL9-215	ENST00000512423	KRTAP19-4	Q3LI73	84 aa		4.24	□□□□□ -1.73
CUL9-215	ENST00000512423	KRTAP4-12	Q9BQ66	201 aa		4.22	□□□□□ -1.73
CUL9-215	ENST00000512423	KRTAP4-11	Q9BYQ6	195 aa		4.19	□□□□□ -1.74
CUL9-215	ENST00000512423	AHNAK	Q09666	5890 aa	Known RBP	4.17	□□□□□ -1.74
CUL9-215	ENST00000512423	MUC5AC	P98088	5654 aa		4.11	□□□□□ -1.75
CUL9-215	ENST00000512423	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.1	□□□□□ -1.75
CUL9-215	ENST00000512423	LCE3C	Q5T5A8	94 aa		4.09	□□□□□ -1.75
CUL9-215	ENST00000512423	KRTAP5-8	O75690	187 aa		4.08	□□□□□ -1.76
CUL9-215	ENST00000512423	KRTAP5-2	Q701N4	177 aa		4.06	□□□□□ -1.76
CUL9-215	ENST00000512423	OBSCN	Q5VST9	7968 aa		4.03	□□□□□ -1.76
CUL9-215	ENST00000512423	KRTAP6-1	Q3LI64	71 aa		4	□□□□□ -1.77
CUL9-215	ENST00000512423	KRTAP9-9	Q9BYP9	154 aa		4	□□□□□ -1.77
CUL9-215	ENST00000512423	KRTAP9-4	Q9BYQ2	154 aa		4	□□□□□ -1.77
CUL9-215	ENST00000512423	MT1A	P04731	61 aa		3.96	□□□□□ -1.78
CUL9-215	ENST00000512423	KRTAP6-2	Q3LI66	62 aa		3.89	□□□□□ -1.79
CUL9-215	ENST00000512423	KRTAP9-6	A8MVA2	160 aa		3.84	□□□□□ -1.79
CUL9-215	ENST00000512423	LUZP6	Q538Z0	58 aa		3.76	□□□□□ -1.81
CUL9-215	ENST00000512423	KRTAP5-1	Q6L8H4	278 aa		3.73	□□□□□ -1.81
CUL9-215	ENST00000512423	MT3	P25713	68 aa		3.63	□□□□□ -1.83
CUL9-215	ENST00000512423	KRTAP4-2	Q9BYR5	136 aa		3.59	□□□□□ -1.83
CUL9-215	ENST00000512423	NDUFAF8	A1L188	74 aa		3.54	□□□□□ -1.84
CUL9-215	ENST00000512423	LCE1E	Q5T753	118 aa		3.43	□□□□□ -1.86
CUL9-215	ENST00000512423	LCE1B	Q5T7P3	118 aa		3.31	□□□□□ -1.88
CUL9-215	ENST00000512423	LCE1C	Q5T751	118 aa		3.18	□□□□□ -1.9
CUL9-215	ENST00000512423		A0A0A0MQY5	61 aa		3.08	□□□□□ -1.92
CUL9-215	ENST00000512423	LCE3D	Q9BYE3	92 aa		3.05	□□□□□ -1.92
CUL9-215	ENST00000512423	LCE3E	Q5T5B0	92 aa		2.95	□□□□□ -1.94
CUL9-215	ENST00000512423	INE1	O15225	51 aa		2.93	□□□□□ -1.94
CUL9-215	ENST00000512423	KRTAP5-11	Q6L8G4	156 aa		2.92	□□□□□ -1.94
CUL9-215	ENST00000512423	LCE1F	Q5T754	118 aa		2.9	□□□□□ -1.95
CUL9-215	ENST00000512423	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.89	□□□□□ -1.95
CUL9-215	ENST00000512423	PHGR1	C9JFL3	82 aa		2.84	□□□□□ -1.95
CUL9-215	ENST00000512423	KRTAP21-2	Q3LI59	83 aa		2.63	□□□□□ -1.99
CUL9-215	ENST00000512423	KRTAP4-4	Q9BYR3	166 aa		2.55	□□□□□ -2
CUL9-215	ENST00000512423	MUC19	Q7Z5P9	8384 aa		2.51	□□□□□ -2.01
CUL9-215	ENST00000512423	PRM1	P04553	51 aa		2.5	□□□□□ -2.01
CUL9-215	ENST00000512423	KRTAP21-1	Q3LI58	79 aa		2.12	□□□□□ -2.07
CUL9-215	ENST00000512423	MUC16	Q8WXI7	14507 aa		1.73	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 59 ms